Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2408 ATGGATCATATAAGTAATGAAGCTACCGTTGATCTTTTTCCAATTGGCCCTTCAGGTATTCTTGGTCGAACAATTGCATTCAGGGTTCTTTTCTGTAGATCCATTTCACATTTAAGGTATCAGATTTTTATTGGGTTATTGGATGTGTTTCGTAAATTTAGGAAATTTTGGGGACCCATTATATCATCATTGCATCCTAGAAATCCTCAAGGGATATTAGCAATTATTACAATTCTTGCTTTTTTATTGAAACGTTATAGTAATGTTAAGGTAAGAGCTGAATTAGCATATAGGAGAAAATTTTGGAGGAATATGATGACAACTGCATTGACTTATGAGGAATGGGCTCATGCAGCTAAGATGCTTGATAGAATGACACCGAAGATGAATGAATCGGATTTTTATGATGTGGAATTGGTTAGGAATAAGGTTGAAGAATTACGACATCGTAGACAAGAGGGGTGTCTTAGAGATATTATATTTTGTATGAGAGCTGATCTTGTTAGAAATTTAGGTAATATGTGTAATCCTGAGCTTCATAAAGGTAGGCTTCATGTTCCTAGACAAATTAAGGAGTATATTGATGAAGTGTCGACTCAGTTGAGAATGGTTTGTCACTCTGATTCCGAGGAGCTTGCTTTGGAAGAAAAACTTGCTTTCATGCATGAAACTAGACATGCGTTTGGGAGGACTGCTTTGTTGTTAAGTGGGGGTGCTTCTCTTGGAGCTTTTCATGTGGGTGTTGTTAAAACACTTGTTGAACATAAGCTTATGCCTAGGATAATTTCTGGTTCAAGTGTAGGATCTATTATGTGCTCTGTTGTTGCCACTAGGTCTTGGCCTGAGCTTCAAAGCTTTTTTGAGGATTCGTTGCACTCTTTACAGTTTTTTGATCAAATGGGTGGGATTTTTACGATTGTGAAGAGGGTCACAACTTTTGGTGCAGTTCATGAGATCAGACAGTTGCAGATTATGTTGAGGCATTTAACAAGCAATCTTACATTTCAAGAGGCTTACGACATGACAGGCCGGGTACTTGGGATTACAGTTTGCTCTCCGAGAAAGCATGAACCGCCTAGATGTCTTAACTACTTGACTTCACCCCATGTTGTTATATGGAGTGCAGTCACAGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCCCAGGAATTGATGGCAAAGGATAGAAGTGGAGATATTGTTCCTTACCATCCTCCATTTAATTTGGGTCCTGAAGAGGGTTCCTCACAAGTGCGCCGTTGGAGGGATGGTAGCTTGGAGATTGATCTACCTATGATGCAGTTGAAAGAGTTGTTCAATGTCAATCATTTTATTGTTAGTCAGGCCAATCCTCATATTGCACCATTCTTGAGATTGAAAGAATTCATACGAGCTTATGGAGGTAATTTTGCTGCCAAGCTTGCTCATCTGGCAGAGATGGAAGTGAAACATCGATGCAATCAAATACTGGAACTTGGTTTTCCATTAGGTGGGCTTGCTAAGCTGTTTGCTCAAGACTGGGAGGGTGATGTTACAGTTGTTATGCCTGCTACTCTTGCTCAGTACTCAAAAATTATCCAGAACCCTTCATACGTGGAGCTTCAAAAGGCAGCTAACCAAGGGAGAAGATGCACTTGGGAGAAGCTTTCAGCCATCAAAGCTAATTGTGGAATTGAGCTTGCTCTAGATGAGTGTGTTGCAATTCTCAATCATATGAGAAGACTCAAAAGAAGTGCCGAGAGAGCTGCTTCTGCTTCTCATAATCTACCCAGTACTACTGTCAAGTTCAGTGCTTCAAAAAGAATTCCATCATGGAATGTCATTGCGCGAGAGAATTCTACAGGATCTCTTGAAGACTTTCTTGCAGACGCTGCTGCTTCATTTAATCATTGTGTCAGTAGTTCCAGTGGAGCCACTGGTAAAAATTCCAAGTATTACCGCAGCATGCATGATGCAAGTGACAGTGAATCCGAAAGTGCTGACTTGAATACTTGGACCAGATCTGGTGGTCCTTTGATGAGAACTACTTCAGCAGATATGTTCGTCGACTTTGTCCAAAACTTAGAAGTTGGTACTGAACTAAATAGAGGAACGGGAACTAATTTTAGCCCTCATGATTTTCAGTACCACAGTCCCAGATTCCCAACATCGGATAGATTCTCTGAGAACTCAGAATCTGATCAGAGAGAAAATGGCAACAGGGTTGTCATGAATGGATCTAGCATAACGGTACCTGAAGGTGATCTTTTGCAGCCCGAAAGTATACTTAATGGAGTTGTGTTTAATGTTGTCAAGAAAGAAGACTTGACACCTTCAAGTAGGAGTGATGATTATGATAGCTATAACAATGATGTTGCTGAGTGTGTCCAAATTGAATGTCCAGGGAAGGAGATGGATGACACTGCTAGCACACCTTCCGAAAACGGAGATGACGAATCTTCAACAGCTAGGAGCCTAACTGAATTGTGA 2469 0.407 MDHISNEATVDLFPIGPSGILGRTIAFRVLFCRSISHLRYQIFIGLLDVFRKFRKFWGPIISSLHPRNPQGILAIITILAFLLKRYSNVKVRAELAYRRKFWRNMMTTALTYEEWAHAAKMLDRMTPKMNESDFYDVELVRNKVEELRHRRQEGCLRDIIFCMRADLVRNLGNMCNPELHKGRLHVPRQIKEYIDEVSTQLRMVCHSDSEELALEEKLAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLMPRIISGSSVGSIMCSVVATRSWPELQSFFEDSLHSLQFFDQMGGIFTIVKRVTTFGAVHEIRQLQIMLRHLTSNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGDIVPYHPPFNLGPEEGSSQVRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPFLRLKEFIRAYGGNFAAKLAHLAEMEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYVELQKAANQGRRCTWEKLSAIKANCGIELALDECVAILNHMRRLKRSAERAASASHNLPSTTVKFSASKRIPSWNVIARENSTGSLEDFLADAAASFNHCVSSSSGATGKNSKYYRSMHDASDSESESADLNTWTRSGGPLMRTTSADMFVDFVQNLEVGTELNRGTGTNFSPHDFQYHSPRFPTSDRFSENSESDQRENGNRVVMNGSSITVPEGDLLQPESILNGVVFNVVKKEDLTPSSRSDDYDSYNNDVAECVQIECPGKEMDDTASTPSENGDDESSTARSLTEL* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2408 822 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 713 - -
Tpr1g2408 822 Pfam Domain of unknown function (DUF3336) 97 226 IPR021771 GO:0004806|GO:0006629
Tpr1g2408 822 Gene3D Cytosolic phospholipase A2 catalytic domain 319 491 - -
Tpr1g2408 822 SUPERFAMILY FabD/lysophospholipase-like 229 575 IPR016035 -
Tpr1g2408 822 MobiDBLite consensus disorder prediction 791 822 - -
Tpr1g2408 822 MobiDBLite consensus disorder prediction 701 736 - -
Tpr1g2408 822 MobiDBLite consensus disorder prediction 807 822 - -
Tpr1g2408 822 Pfam Patatin-like phospholipase 233 425 IPR002641 GO:0006629
Tpr1g2408 822 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 233 436 IPR002641 GO:0006629
Tpr1g2408 822 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 713 - -
Tpr1g2408 822 CDD Pat_SDP1-like 163 570 - -
Tpr1g2408 822 Gene3D Cytosolic phospholipase A2 catalytic domain 230 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2408 Tpr-Chr1 27159143 27165218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2408 1 799 Acyl Lipid Metabolism Gene Families AT5G04040 73.030 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2408 K14674 - gmx:100817268 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1428 6 15425380 15429656 Tpr1g2408 1 27159143 27165218 PCT