Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0958 ATGAAAGGCATTGAAATCTTCTGTGCATCACAAGCCTCAACAGCAATATGTCTTACCACTGATCATGCATCCTCCTCTTCTTCATCTTCTTCCAACACCATTCATTTTGGTGGTAGAGCCCTCGATCGTCACAACCCGATCATCACAGATCCAAAAAGAACACCAGCAAGAGATTTCACTTCCCCTAGTTCTTCTTCTCAATCACCCATCAACCCAAAACCTCTCCATGATCACAAAAAATCCAAGAAAAAGAAAAATGTAACAAAGGCTACTCATGATCAGAAGAAGAAAACTACTACTACGACTACTACTGCTGCGGAAAAATTAACTGAACATGTTGCTAATAATTACTCTTCAAAACCAATTAATAGTATTTTAAGAAGGAGTTGGGTTAAGCCACCTTCTGATTTAATCACTCCTCCTACTATTTCATCAAGATATTTGCTTGGTGACACAATTTCTTTGGATGGTGTTGGTGGTGTATTAGATTATGACCCTGTTTTGAGTTTAAACAAGGTTGATGATAACAAAAAGAAAGCTCAAATTTTTCATGAAGATGAAAAGAATTATTCATCTAAACAACAACACTCTAGTTCCTCTGTTTCAAAGTCTGATTCCTCAAACCAGGTTGTGGTATTGAGGGTTTCTCTGCACTGTAAAGGTTGTGAAGGGAAGGTTAGGAAACATCTCTCTAGAATGCAAGGGGTTACATCCTTCAACATAGACTTTGCAGCAAAGAAGGTAACAGTTGTTGGAGATGTGACTCCATTGAGTGTAATGGCAAGCATATCAAAGGTCAAGACCGCACAAATTTGGCCAGAATCACCAATTGGATCTACAGGTGCTGCTGAATCAAAGAAATAG 864 0.3854 MKGIEIFCASQASTAICLTTDHASSSSSSSSNTIHFGGRALDRHNPIITDPKRTPARDFTSPSSSSQSPINPKPLHDHKKSKKKKNVTKATHDQKKKTTTTTTTAAEKLTEHVANNYSSKPINSILRRSWVKPPSDLITPPTISSRYLLGDTISLDGVGGVLDYDPVLSLNKVDDNKKKAQIFHEDEKNYSSKQQHSSSSVSKSDSSNQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVMASISKVKTAQIWPESPIGSTGAAESKK* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0958 287 MobiDBLite consensus disorder prediction 56 72 - -
Tpr6g0958 287 Pfam Heavy-metal-associated domain 213 259 IPR006121 GO:0046872
Tpr6g0958 287 MobiDBLite consensus disorder prediction 76 91 - -
Tpr6g0958 287 MobiDBLite consensus disorder prediction 183 205 - -
Tpr6g0958 287 MobiDBLite consensus disorder prediction 21 104 - -
Tpr6g0958 287 MobiDBLite consensus disorder prediction 21 36 - -
Tpr6g0958 287 Gene3D - 206 270 - -
Tpr6g0958 287 SUPERFAMILY HMA, heavy metal-associated domain 209 267 IPR036163 GO:0046872
Tpr6g0958 287 CDD HMA 212 265 IPR006121 GO:0046872
Tpr6g0958 287 ProSiteProfiles Heavy-metal-associated domain profile. 209 266 IPR006121 GO:0046872
Tpr6g0958 287 PANTHER COPPER CHAPERONE 1 276 - -
Tpr6g0958 287 PANTHER OS08G0405700 PROTEIN 1 276 IPR044526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0958 Tpr-Chr6 8419732 8422122 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0958 - - cam:101501884 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0958 6 8419732 8422122 Tpr6g0958 6 8419732 8422122 ECH
Tpr6g0958 6 8419732 8422122 Tpr1g2152 1 22787146 22788903 PCT