Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2152 ATGAAAAGAATGGACATTTTCTGTGCTTCTCAAGCCTCAACAGCAATATGTCTTAGCATGGAACAAGCTTCATGCTCATCTTCCAATACTATTCAACTTGGAGGCAGAGTCATTGATCGCCACAACCCTATTATCAATGATTCAAGAAGAAGCACTTCAAAAACTATAACTGCTCCATGTTCTTCTTCTCAGCTACCTATTGATCCCAAGAAAAAAACCTTGTCTTCTTCTTCTTCTTCCAAGCCAAGTAATGGACACAACATGGAAAATGGAACTAAAGTTTATGAGGAAAAGAAGAAAAGTACAGCAGAAGAAAAGGTTACCGAGCATGTCAACAAGAGTTACTATTCTAAGCCAATTGATTTCATTCTGAAAAGGAGATCCATTAAGTTACCTGCTGATTCAATCACTCCACATGGTTCAACTAGATCTTTACTTAGTGACACAGCTTTTTTAGATGCTTCCACAGATAATGATCCTGTTTTGGCATTAACTAAGGTTGATAATAAAAAGGCTGAAATTGTTGGTCAAGATGAATCTAATCCTGCATCTAAACTCTCTAATTCTTCTTCTCCAAAATCGGGTTCGCCAGACCAGCTGCAGGTTGTAGTACTTTGGGTTTCTTTGCATTGCAGAGCATGTGAAGGGAAGGTGAGGAAACACCTCACTAGAATGCAAGGAGTTAGCTCATTCAACATAGATTTTGCTGCAAAGAAGGTGACAGTAGTGGGAGATGTGACTCCATTTAGTGTCTTGGAAAGCATATCAAAGGTGAAGAATGCACAATTTTGGCCAAAAGTTGGATCTGACATCAAACAAACAAAATTCATCTAA 834 0.3837 MKRMDIFCASQASTAICLSMEQASCSSSNTIQLGGRVIDRHNPIINDSRRSTSKTITAPCSSSQLPIDPKKKTLSSSSSSKPSNGHNMENGTKVYEEKKKSTAEEKVTEHVNKSYYSKPIDFILKRRSIKLPADSITPHGSTRSLLSDTAFLDASTDNDPVLALTKVDNKKAEIVGQDESNPASKLSNSSSPKSGSPDQLQVVVLWVSLHCRACEGKVRKHLTRMQGVSSFNIDFAAKKVTVVGDVTPFSVLESISKVKNAQFWPKVGSDIKQTKFI* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2152 277 MobiDBLite consensus disorder prediction 48 90 - -
Tpr1g2152 277 CDD HMA 209 257 IPR006121 GO:0046872
Tpr1g2152 277 Pfam Heavy-metal-associated domain 205 257 IPR006121 GO:0046872
Tpr1g2152 277 ProSiteProfiles Heavy-metal-associated domain profile. 201 258 IPR006121 GO:0046872
Tpr1g2152 277 MobiDBLite consensus disorder prediction 180 195 - -
Tpr1g2152 277 MobiDBLite consensus disorder prediction 42 107 - -
Tpr1g2152 277 MobiDBLite consensus disorder prediction 173 195 - -
Tpr1g2152 277 SUPERFAMILY HMA, heavy metal-associated domain 200 258 IPR036163 GO:0046872
Tpr1g2152 277 Gene3D - 198 262 - -
Tpr1g2152 277 PANTHER OS08G0405700 PROTEIN 1 271 IPR044526 -
Tpr1g2152 277 MobiDBLite consensus disorder prediction 91 107 - -
Tpr1g2152 277 PANTHER COPPER CHAPERONE 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2152 Tpr-Chr1 22787146 22788903 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2152 - - gmx:100813295 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0958 6 8419732 8422122 Tpr1g2152 1 22787146 22788903 PCT