Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0886 ATGGTTCAGAAAGAAGAAGCCGATAAGAAAAACGACGCTCTCCCCTCTGCCGTTTTCAAATTAGACTTACATTGCGAAGGATGCGTCAAGAAAATCAAACGCGCCGTTCTCCATTTAGATGGTGTGGAAGATGTTAAAGTCGATATGCCTGGTAATAAAGTGACAGTTATCGGAAAAGTGGATCCTAACAAAGTTCGTGATAAACTGGCGGACAAAATTAAGAAGAACGTTGAGATCGTTTTGTCTCCGCCGAAAAAAGATGCCGCCGCCGGTGATAAACCGCAGCCGGAGAAGAAGAAACAGGAGGAAGAGAAGAAGAATAAGCCCGACGACAAAAAACCGGACAAAGCAGAGGAAAAATCTCCCAAACAGTCGGTTCAAAACACGGTGGTTTTGAAAATTAGATTACACTGTGACGGTTGCATTCAAAAAATTGAAAAGATTATCCTCAAAATCAAAGGAGTTGAATCAGTGAATACTGATGGAGGAAAAGATTTGGTGACGGTAAAAGGAACAATTGAAGCAAAGGAAATTGTACCTTATCTTACGGAAAAGTTGAAAAGGACCGTGGAGGTGGTTCAACCAAAGAAAGAAGATGGTAAAAATAAAGAGAAAGATGAAGGAAAACAAAAATCAAAAGAAAATCAAGGTGGCGGCGGCGGAGGCGGTGATAAGAAAGAAGGTGGGAAAATAGAGGATGTTGCAACAAAAGTTGAGGTTAATAAAATGGAGCATCATGGTTATGGGCACCAACCTCCTATGTATTGGTATGATGGATATGAACCGGGTCAAAGTAGTAACCACACGGTGGAGGTTCAACAAGGGTATCCTAATCAACAAGGATATTATGGTTATAATAATATGAATCAACAAGAGTATGGTTATAATGGTTATAATCATCATGTGAATGAACAAGGGTATGGTTATAATCATGTGAATCAAGGTCAAGGTGGATATATGGTAGAGCCTCAACAACCACCATTTTATATGAATCCAAATCATCCTCCTCCACAAATGTTTAGTGATGAAAACCCCAATGCATGTTCCTTAATGTGA 1056 0.3977 MVQKEEADKKNDALPSAVFKLDLHCEGCVKKIKRAVLHLDGVEDVKVDMPGNKVTVIGKVDPNKVRDKLADKIKKNVEIVLSPPKKDAAAGDKPQPEKKKQEEEKKNKPDDKKPDKAEEKSPKQSVQNTVVLKIRLHCDGCIQKIEKIILKIKGVESVNTDGGKDLVTVKGTIEAKEIVPYLTEKLKRTVEVVQPKKEDGKNKEKDEGKQKSKENQGGGGGGGDKKEGGKIEDVATKVEVNKMEHHGYGHQPPMYWYDGYEPGQSSNHTVEVQQGYPNQQGYYGYNNMNQQEYGYNGYNHHVNEQGYGYNHVNQGQGGYMVEPQQPPFYMNPNHPPPQMFSDENPNACSLM* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0886 351 MobiDBLite consensus disorder prediction 193 231 - -
Tpr6g0886 351 MobiDBLite consensus disorder prediction 90 122 - -
Tpr6g0886 351 Gene3D - 124 199 - -
Tpr6g0886 351 SUPERFAMILY HMA, heavy metal-associated domain 128 184 IPR036163 GO:0046872
Tpr6g0886 351 CDD HMA 23 75 IPR006121 GO:0046872
Tpr6g0886 351 SUPERFAMILY HMA, heavy metal-associated domain 19 71 IPR036163 GO:0046872
Tpr6g0886 351 MobiDBLite consensus disorder prediction 193 213 - -
Tpr6g0886 351 Pfam Heavy-metal-associated domain 133 191 IPR006121 GO:0046872
Tpr6g0886 351 Pfam Heavy-metal-associated domain 19 74 IPR006121 GO:0046872
Tpr6g0886 351 ProSiteProfiles Heavy-metal-associated domain profile. 23 71 IPR006121 GO:0046872
Tpr6g0886 351 MobiDBLite consensus disorder prediction 81 126 - -
Tpr6g0886 351 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 4 351 IPR044594 GO:0046872
Tpr6g0886 351 Gene3D - 12 78 - -
Tpr6g0886 351 ProSiteProfiles Heavy-metal-associated domain profile. 136 191 IPR006121 GO:0046872
Tpr6g0886 351 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 4 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0886 Tpr-Chr6 7712472 7715025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0886 - - gmx:100795652 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0886 6 7712472 7715025 Tpr6g0886 6 7712472 7715025 ECH
Tpr6g0886 6 7712472 7715025 Tpr1g4136 1 47650384 47652347 PCT