Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4136 ATGGGAGAGCAAAAGAATGAAACCGTTAAGAAAGCTGACGAAGGAACAAAGAAAGACGACAGTCCTGTTCCTGTCGTTTACAAACTCGACTTACATTGTGAAGGATGCATTAAAAAAATTAAACGAACCGTTCGTCATTTCGCTGGTGTTGAATCCGTTAAAGCAGATCTACCTTCAAACAAAGTGACCGTTACCGGTAAATTTGACGCCGTCAAATTACAAGAGAAACTGGTTGAGAAATCTAAGAAGAAAGTTGAACTCCTAACACCGCCACCAAAAAAAGACGGCCCCGCCGCTGAGAAACCGGCAGAGAAGAAATCCGACGAGAAAAAACCTGAAGAGAAGAAAGCTGAAGAGAAAAAACCTGAAGAAAAAAAGCCTAAAGAGAGTACGGTGGTTTTGAAGATCAGATTGCACTGTGACGGTTGCATTACGAAAATTAAAAAAATCATTATGAAGTTCAAAGGGGTTGAAACGGTGAAATTTGACGGAGACAAGGATTTAGTAACAGTGAAAGGAACAATGGAACCGAAGGATTTGATAGAGTATCTGAAAGAGAAACTGAAGAGAAACGTTGATATGGTTCCACCGAAGAAAGAAGAAGAGAAGAAAGAAAAAGAAGGTGGTGGAGAAAAGAAAGAGAAAGACGGTGGAGGTGAAAAGAAAGAGAAAAAAGATGGTGAGAAGAAAGTGGACGGTGGAGATCAAGCGAAGGTGGAAGTTAATAAAATGGAGTATCAGTACCCGATGCAGTCTCCAATGTATTGGTATGAGGGACAAAGTAGTAATTATGCTATGGATCAGTATCAACCTGGGTATGGTGGTGGTGATCATCATTATGATCAACAACAACAACATTATATGATGAATAATAATCATGGTGGTGGTTATCCTATGCAGCCACCTCAAGTACCGTATTACATGCACCCTAGTCATCCTCCACCACAGATGTTCAGTGACGAGAATCCCAACGCCTGTTCGCTTATGTGA 990 0.4081 MGEQKNETVKKADEGTKKDDSPVPVVYKLDLHCEGCIKKIKRTVRHFAGVESVKADLPSNKVTVTGKFDAVKLQEKLVEKSKKKVELLTPPPKKDGPAAEKPAEKKSDEKKPEEKKAEEKKPEEKKPKESTVVLKIRLHCDGCITKIKKIIMKFKGVETVKFDGDKDLVTVKGTMEPKDLIEYLKEKLKRNVDMVPPKKEEEKKEKEGGGEKKEKDGGGEKKEKKDGEKKVDGGDQAKVEVNKMEYQYPMQSPMYWYEGQSSNYAMDQYQPGYGGGDHHYDQQQQHYMMNNNHGGGYPMQPPQVPYYMHPSHPPPQMFSDENPNACSLM* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4136 329 MobiDBLite consensus disorder prediction 1 24 - -
Tpr1g4136 329 MobiDBLite consensus disorder prediction 82 130 - -
Tpr1g4136 329 SUPERFAMILY HMA, heavy metal-associated domain 26 82 IPR036163 GO:0046872
Tpr1g4136 329 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 329 IPR044594 GO:0046872
Tpr1g4136 329 CDD HMA 31 86 IPR006121 GO:0046872
Tpr1g4136 329 MobiDBLite consensus disorder prediction 97 130 - -
Tpr1g4136 329 Gene3D - 23 95 - -
Tpr1g4136 329 Gene3D - 128 202 - -
Tpr1g4136 329 Pfam Heavy-metal-associated domain 135 189 IPR006121 GO:0046872
Tpr1g4136 329 Pfam Heavy-metal-associated domain 30 81 IPR006121 GO:0046872
Tpr1g4136 329 ProSiteProfiles Heavy-metal-associated domain profile. 31 64 IPR006121 GO:0046872
Tpr1g4136 329 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 329 - -
Tpr1g4136 329 MobiDBLite consensus disorder prediction 194 238 - -
Tpr1g4136 329 SUPERFAMILY HMA, heavy metal-associated domain 131 186 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4136 Tpr-Chr1 47650384 47652347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4136 - - ccaj:109790448 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4136 1 47650384 47652347 Tpr1g4136 1 47650384 47652347 ECH
Tpr6g0886 6 7712472 7715025 Tpr1g4136 1 47650384 47652347 PCT