Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0831 ATGCGAGGTTCTGTTCCCGTTTTGGTAATCTTCGCCGCAATGGCGGTTACGCTCGTATACGGAGGTTTTCCGGGGAGTTATCTTCTTCACCGCTCCATCCCTCTTAACCACAAAGTTCAACTGACCACTCTCAGAGCTCACGACACAGCTCGTCACGCTCGAATCTTGCAAGCTACTGATCCCCCCGCCGCCGGCATTCTTGACTTCTCAGTCCAAGGAACCTCCGATCCTTACTTAGTTGGGTTGTATTTTACCAAAGTGAAGTTAGGGTCTCCTGCTAAAGAATTTTACGTTCAGATTGATACTGGAAGTGATATCTTGTGGCTTAATTGCAATACTTGCAATAATTGCCCCCAATCTAGTGGCCTAGGGATTGAGCTCAATTTCTTTGATACGGCTAGTTCGTCCACTGCTGCATTGGTTTCCTGCTCGGACCCAGTGTGTTCTTATGCGGTTCAAACTGCCACAAGTCAGTGCTCTTCTCAGGTTAATCAATGCAGCTACACTTTTAAGTATGGGGATGGAAGTGGGACATCCGGTTATTATGTTTATGATGCTATGTATTTTGACGTGATCATGGGACAGTCTGTGTTTTCTAACTCTTCAGCTAACGTAGTTTTTGGGTGTAGCACCTATCAGTCTGGGGATTTGGCTCAGACAGAAAAGGCGGTTGATGGAATTTTTGGGTTTGGCCCCGGTGCTTTATCTGTTATATCACAATTGTCATCACAAGGCATGGCGCCCAAAGTGTTCTCTCATTGCTTAAAGGGAGAGGGCAATGGAGGAGGTGTACTAGTTCTTGGTGAAATTTTGGAGCCAAATATTGTTTATACTCCACTTGTCCCATTACAGCCTCATTACAATTTAAATCTTCAAAGCATTGCTGTTAATGGACAACTTCTCCCAATCGATCAAGATGTATTTGCAACAGGTAACAATCGAGGAACAATAGTTGATTCTGGTACTACATTGGCATACCTTGTTCAAGAAGCTTATGATCCTTTTCTCAATGCTATAACTACCGCTGTGTCACAGTTTTCCAAACCGATTATTTCCAAAGGAAACCAGTGTTATCTGGTCGCAACCAGCCTAGGTGATATATTTCCTCAAGTCAGTTTAAATTTCATGGGTGGTGCATCCATGGTTTTAAAACCAGAACAGTATCTAATACATTATGGTTTCCTGGATGGTGCTGCGATGTGGTGCATTGGTTTCCAAAAGGTGCAGAAGGGATTCACAATTTTAGGAGATCTTGTCCTAAAAGATAAGATTTTTGTATACGACTTGGCGAATCAACGAATTGGGTGGACCGACTATGATTGTTCATCGGCTGTAAATGTCTCTGTGGCTACGACCAAGAGTAAGGACGCATACATCAGTGCAGGACAGATGAGTGTCAGCTCCTCACACGTAGACATTCTCTCCAAGTTTCTACTTGTAAACATTGTGGCTTTTCTTGTGCATATAACAGTCTTCATGGAGCCCCGGTTTTTGTAG 1497 0.4362 MRGSVPVLVIFAAMAVTLVYGGFPGSYLLHRSIPLNHKVQLTTLRAHDTARHARILQATDPPAAGILDFSVQGTSDPYLVGLYFTKVKLGSPAKEFYVQIDTGSDILWLNCNTCNNCPQSSGLGIELNFFDTASSSTAALVSCSDPVCSYAVQTATSQCSSQVNQCSYTFKYGDGSGTSGYYVYDAMYFDVIMGQSVFSNSSANVVFGCSTYQSGDLAQTEKAVDGIFGFGPGALSVISQLSSQGMAPKVFSHCLKGEGNGGGVLVLGEILEPNIVYTPLVPLQPHYNLNLQSIAVNGQLLPIDQDVFATGNNRGTIVDSGTTLAYLVQEAYDPFLNAITTAVSQFSKPIISKGNQCYLVATSLGDIFPQVSLNFMGGASMVLKPEQYLIHYGFLDGAAMWCIGFQKVQKGFTILGDLVLKDKIFVYDLANQRIGWTDYDCSSAVNVSVATTKSKDAYISAGQMSVSSSHVDILSKFLLVNIVAFLVHITVFMEPRFL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0831 498 SUPERFAMILY Acid proteases 78 445 IPR021109 -
Tpr6g0831 498 CDD pepsin_A_like_plant 83 441 IPR034161 -
Tpr6g0831 498 Pfam Xylanase inhibitor C-terminal 286 437 IPR032799 -
Tpr6g0831 498 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 460 - -
Tpr6g0831 498 Gene3D Acid Proteases 66 269 IPR021109 -
Tpr6g0831 498 Gene3D Acid Proteases 270 448 IPR021109 -
Tpr6g0831 498 PRINTS Pepsin (A1) aspartic protease family signature 89 109 IPR001461 GO:0004190|GO:0006508
Tpr6g0831 498 PRINTS Pepsin (A1) aspartic protease family signature 316 327 IPR001461 GO:0004190|GO:0006508
Tpr6g0831 498 PRINTS Pepsin (A1) aspartic protease family signature 413 428 IPR001461 GO:0004190|GO:0006508
Tpr6g0831 498 ProSiteProfiles Peptidase family A1 domain profile. 83 437 IPR033121 -
Tpr6g0831 498 PANTHER ASPARTYL PROTEASES 7 460 IPR001461 GO:0004190|GO:0006508
Tpr6g0831 498 Pfam Xylanase inhibitor N-terminal 83 268 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0831 Tpr-Chr6 7157598 7162639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0831 78 443 Miscellaneous Gene Families AT1G44130 27.763 4.43e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0831 - - gmx:100804147 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0831 6 7157598 7162639 Tpr6g0831 6 7157598 7162639 ECH
Tpr6g0831 6 7157598 7162639 Tpr1g4252 1 49467030 49472218 PCT