Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0824 ATGGCATCAAGGAAAGTCTACAAGGAAGACAGAGCAGAAGCAGCTGCAAAGCTAGCTGCAAAAGACATTGGTGACATAAACAGAACAAACGAAAGAGAAGAAGGTTACTCACTTAATTCTGAAACACAGTTTAAACAAGCAAGAGCTGAAGCAGCTGCAAAACTTGCTGCTAAAGATCTTGAAGATGTTAACAGAGCAAAAGAAAGTGCATTTAGTTCTGCAACAGGATATTATCAACAAGAAGAGAAACCAGGTGTTATTGGTTCTGTAGGTTCAATGTTGAAAGCTGCTAAAGATGCTGTAGTTGGTAAGAGTTACGAAGCTGGTGAAAAAGCTAGGGATACTACAGATTATGCAGCTCAGAAAACAAAAGAGAATACAAACTATGCTGCAGAGAAAGCGAGGGAAGCGAAAGACACTACTGCGAATAAAGCAGGGGAGTATACAAACTATGCTGCAGAGAAAGCGAGGGAAGCTAAAGACACTACTGCGAATAAAGCAGGGGAGTATACAAACTATGCTGCAGAGAAGGCTAAGGAGGCGAAAGATGCAACTGTTCAGAAAGCTGGAGAGTGCAAGGATTATGCTGCAGAGAAGGCTAAGGAGGCGAAAGATGCGACGATGCAGAAGGCTGGAGAAGCGAAGGATGCTACAATGAATAAGGCTGGGGAGTATAAGGATTATACTGCTGAAAAGGCTAAAGAAGGGAAAGATACTACTGTGGGGAAGCTTGGAGAGTTTAAGGATTCAGTTATGGGTTTCTTGACTGGGAAGAAAGATGAAACTAAGGAAATGATGAGTGGAACGGAAGAAGATGAGAGGATGGGAATGGGTGATTTAAGGATGGGAGGAAGAGGAGGGATGGGTAGAGAGAAAGTGGTGGTGAAGGTGGATGAGAGTAGGCCAGGAGTGGTGGCGGATGGGCTGAGAGCAGCAGCAGGAATGGATAAGGGTGATACAGGACATTTGGAGGAAGAAGGCACCATTCATGTTGAGCGTCGTCGTGAGAAAATGTGA 1017 0.4425 MASRKVYKEDRAEAAAKLAAKDIGDINRTNEREEGYSLNSETQFKQARAEAAAKLAAKDLEDVNRAKESAFSSATGYYQQEEKPGVIGSVGSMLKAAKDAVVGKSYEAGEKARDTTDYAAQKTKENTNYAAEKAREAKDTTANKAGEYTNYAAEKAREAKDTTANKAGEYTNYAAEKAKEAKDATVQKAGECKDYAAEKAKEAKDATMQKAGEAKDATMNKAGEYKDYTAEKAKEGKDTTVGKLGEFKDSVMGFLTGKKDETKEMMSGTEEDERMGMGDLRMGGRGGMGREKVVVKVDESRPGVVADGLRAAAGMDKGDTGHLEEEGTIHVERRREKM* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0824 338 MobiDBLite consensus disorder prediction 306 325 - -
Tpr6g0824 338 Pfam Late embryogenesis abundant protein 171 214 IPR004238 -
Tpr6g0824 338 Pfam Late embryogenesis abundant protein 205 246 IPR004238 -
Tpr6g0824 338 Pfam Late embryogenesis abundant protein 127 170 IPR004238 -
Tpr6g0824 338 PANTHER DAUER UP-REGULATED-RELATED 40 279 - -
Tpr6g0824 338 PANTHER DAUER UP-REGULATED-RELATED 1 34 - -
Tpr6g0824 338 Gene3D - 123 171 - -
Tpr6g0824 338 Gene3D - 172 216 - -
Tpr6g0824 338 Gene3D - 217 275 - -
Tpr6g0824 338 MobiDBLite consensus disorder prediction 258 288 - -
Tpr6g0824 338 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 40 279 - -
Tpr6g0824 338 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 1 34 - -
Tpr6g0824 338 MobiDBLite consensus disorder prediction 258 279 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0824 - - mtr:MTR_7g103280 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0824 6 7080553 7081955 Tpr1g4243 1 49318223 49319737 PCT