Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4243 ATGGCATCAAGACAACCAAGACACGTTGAAGAAATCAAAGTAACAACAGAGCACAACCCAAGTGCTACTTCAAACCAACAGCAACAACACAATGATGACAATCGTGGTGTAATTGGATCAGTGATGAAGGCAGTTCATGACACCTATGAGAATGCAAGAGAAGCTGTAGTTGGCAAGAGAGACCCTGCAACAACAGAAGAAGTTCATGTTTTCGACAACGACAATGATCTAGTCTCAGGTGGTGGTGAAGTTAGAGACATATCAGCCAACAAATCGTGTGGCGTATACGATGCAACAAAGGAAAAAACTAACGAGTATGCAGATTATACAGCTGAGAAAGTAGAGGAAGCTAAGAACAAAGCAGGGGAGTACAAAGACTATGCTGCAGAGAAGGCGAAAGAAGGGAAAGATGCAACAATGAATAAGATGGGTGAGTATAAGGATTATACAGCTGAGAAGGCGAAAGAAGGGAAGGATAATACTGCATGGAAGATTGGAGAGATGAAAGACTCAGCTGTTGATGCTGCCAAAAGGGCTATGGGTTACTTGGGTGACAAGAAAGAGGAAACTAAGGAGAAAACTGCAGAGACTGCTGAGGCTGCTAAACAGAAGACTGCAGAAACTACAGAAGCTGCTAAACAGAAAACTGCAGAGACTAAAGACTCTGCTGTTGATGCTGCTAAAAGGACTATGGGTTACTTGGGTGACAAGAAAGAGGAAACTAAACAGAAAACTGCAGAGACTGCTGAGGCTGCTAAGCAGAAGACTGCAGAAACTACAGAAGCTGCTAAACAGAAAACTGCAGAGACTGCTGAAGCTGCTAAACAGAAAACTGCAGAGGCAAAAGATAAGACCAAGGAAATGATGAGTGGAGCAGAAGAAGAGGCAAGAAGGAGGAAAGATAAAGGATTTGGAGAGGAAACATGGAGGCGTGGAAATGTTGGGGTGATAAGAACAGAAGATACTCGAACAGGAACGGTGGCGGAGAGGCTGAAAGCGGCGGATCAGATGACAGGTCAGACATTCAATGATGTGGGACCTTTGGATGATGAAGGGGTTACTCGTGTAGGACTACTTGATATTAAGAAAAAGTGA 1095 0.4374 MASRQPRHVEEIKVTTEHNPSATSNQQQQHNDDNRGVIGSVMKAVHDTYENAREAVVGKRDPATTEEVHVFDNDNDLVSGGGEVRDISANKSCGVYDATKEKTNEYADYTAEKVEEAKNKAGEYKDYAAEKAKEGKDATMNKMGEYKDYTAEKAKEGKDNTAWKIGEMKDSAVDAAKRAMGYLGDKKEETKEKTAETAEAAKQKTAETTEAAKQKTAETKDSAVDAAKRTMGYLGDKKEETKQKTAETAEAAKQKTAETTEAAKQKTAETAEAAKQKTAEAKDKTKEMMSGAEEEARRRKDKGFGEETWRRGNVGVIRTEDTRTGTVAERLKAADQMTGQTFNDVGPLDDEGVTRVGLLDIKKK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4243 364 MobiDBLite consensus disorder prediction 185 200 - -
Tpr1g4243 364 Pfam Late embryogenesis abundant protein 115 146 IPR004238 -
Tpr1g4243 364 Pfam Late embryogenesis abundant protein 147 179 IPR004238 -
Tpr1g4243 364 Pfam Late embryogenesis abundant protein 125 168 IPR004238 -
Tpr1g4243 364 Coils Coil 257 295 - -
Tpr1g4243 364 MobiDBLite consensus disorder prediction 206 251 - -
Tpr1g4243 364 MobiDBLite consensus disorder prediction 1 15 - -
Tpr1g4243 364 MobiDBLite consensus disorder prediction 1 37 - -
Tpr1g4243 364 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 198 356 - -
Tpr1g4243 364 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 101 219 - -
Tpr1g4243 364 PANTHER EMBRYOGENESIS ABUNDANT PROTEIN, PUTATIVE-RELATED 19 118 - -
Tpr1g4243 364 PANTHER DAUER UP-REGULATED-RELATED 101 219 - -
Tpr1g4243 364 PANTHER DAUER UP-REGULATED-RELATED 198 356 - -
Tpr1g4243 364 PANTHER DAUER UP-REGULATED-RELATED 19 118 - -
Tpr1g4243 364 Gene3D - 122 183 - -
Tpr1g4243 364 MobiDBLite consensus disorder prediction 16 35 - -
Tpr1g4243 364 MobiDBLite consensus disorder prediction 185 306 - -
Tpr1g4243 364 MobiDBLite consensus disorder prediction 268 306 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4243 - - aprc:113873399 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4243 1 49318223 49319737 Tpr1g4243 1 49318223 49319737 ECH
Tpr6g0824 6 7080553 7081955 Tpr1g4243 1 49318223 49319737 PCT