Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0778 ATGGAGTTTGGTGAAACAGAGAAAAAAGAGCTTAATTCAAAGGTTCAATGGATACCCACAACACCATTTAAGCCAATTGCTCAAAGACCAGTACCGATCTGCAATTCTGGAGAGAGAAATCAGCTGAATTCTCATTTCAATGGAGAATTTTCATGTAATGAAACTTTAAGCGGTGGAGATGTTAACAACCTGTCAGAAACTGTGGCTGTAGCATCAGACATTGGTGGTGACAATGCTAGAACTAGGGTACAGATATCCTTTGATGATAATGTTCCTAGTTCAAGTAATAGTTTTGCTGAACTTTTGGCTCAGGCAGAGGCGGCGCCATCGTCGTCGTATTCGAATGCATCATATGGATTTCCAGGGAACCAATTTGTTCCTGGTGTGTGGAACTCACAGTTCAACCAAAATTATGCATTTTTATATCAGCAACAACCCTTCCTCAATTTAATTCATAACGGTTACCAAGATCCTCAGGGTACACCGTACTTGGGTTATTATGACAAGACCAATTCCCAGGTTGCTCTGCCTCCAGAAAATAACACAACATCAAAAGACAAACAAGTTGTGGAGACACAAATATGTATGGATCAAAGGGAAGACGAGAATAATGCCTCGGCCACAATGTGCAACAATTCACAAAACAAACTTTATGATCCTGTTATAGACTTGAATGCTGTTTCTACACCATGCAAGGAGAATAACAACCACAATAAGGAAATACACCATGCTATTGATCTTAATGAAATACCCCAAACAAAACCGAAAAGAAGAAAGCATCGCCCAAAGGTCATAAAAGAAGGCAAACCCAAAAAAACTCCAAAGCCACCCACTCCAAAGCCTGATCAATCAAAAGAAAACTCAACTCAAAAGAGGAAGTATGTGAGAAAGAAAGAATCAAACGCAACTCCAGCAGAAGTGACAGGGGAATGCACTGAACCATTGATGTCTGAGTCTGCCAAAAAGACATGTAGAAGGTCCTTAATCTTTGACATACCAGAACAACCAAGAGATGAAAATTCTGCATGCAGAGAAGAAAATGCAACTACATGTTTTGGTGGAGAAATTGGTATAGAGGTCCAGGAAACACATGCTTTACAAGAAGATGCACAAGCCTCCAGCAGTAACGGAAAACTTTCCAATACAGGATCACAAGAAGTTCGTTCCAAGAGAAAACTATCTGGTACCGCAGAACAAGCAGACAGCAGCAGCATTAATATGATTGGGGCCCAATATAATTTAATGCAAGCGTACCAGTCAAAGTATTGGGCCCAATTTCCAAATGTTCAGAAGAAAAAGAGAAGTGAGAAGGGGAAATTTTCAAATACATCTAATACATCTTCCATGGCTGCTATTAAAGATGTACAACTTGCAAGATGCTCTGAAGAAAATGCTAGATCACATCCGGATGCATCAACTTCTAATGGCTGGACTACTGCTTCTGCTTCTGAATATGAAACAGCGAGACTCCTAACCATGCTAGCTACAGAAACAGCTACCTATGACAAATCTCAATCGCTCGAGTACAATTTATTTTCAGGACAAAGCAGACCAACCAAAAAAAGATCCAGAGTCACTACCAGAATTCAAGATTGCACTTCACTGACCATAATTAGAAACTGTGATGCCAAACTGACTAATATTGCAAGCTTAGGCAGCTCTGATAGACAGACATTTGAGGATGCAGAAAGACCACAAACAGGCATTGATGCTCTAGTTGCGGAGATGCGTGCATCACTCACAAAAAAGAAACGGAGTAAAAAGAGAAGTGCGTCAATCAGTTCTGCATATTCTCGCATAAACGAAATGCAACATCAGCCCTTGCAGAATTCATTAGGTGTTGCTTGTGGAGAGAGTTGGAAAAGTGTACCTACTGTGGACACGTTAACACAGCAATTTAGACACCTAAACATATATAGAGAAGCTAGAGAGCTTGTGTTGTGTGAACAGAATGCACTTGTCCCTTACAACCGGCAAAATGAAAAACACAAAGGCCAGGTTCATAAGTATGGCACCATCATTCCCTTTGAGGGTGTGTTTGATCCCATCAAGAAACAGCGCCCACGACCTAAAGTTGACCTTGATGAGGAAACTAATAAAGTGTGGAAACTTCTGATGTTGGATATAAACAGTCATGGGGTTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAAATGAACGAAATGTTTTCCGAGGAAGAGCAGAGTCATTTATTGCACGGATGCATCTTGTTCAAGGAGACAGGCGTTTTTCTCGATGGAAAGGATCAGTGGTGGATTCGGTGGTTGGAGTTTTTCTCACTCAAAATGTCTCAGATCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATTTCCACTGAAGTCAAGCAGCAACTTCGATACATGCCATGAGGAAAGTGCAAGCATGATAGTCAACACACCAGAGGTGCAGATTGTGGAACCAGAAGAAAATGCAAAGCTGGAAGACATAATATTGAATCAATCTGTTCATGAATTGAGTTCTATGACAAAAGATATCATTGAACATTCTGAAGAAAGAGAAACTGTTGACAGCAACAGCATTGATTCCTGTGGAACTACTGGCAGCTTAAATAGCTTAAAAGATGAATCAAATTGTAAACTGTCAGAACCAGCTCAAAGCAATATTAGGGAACATGGTACAATGGAATTTGTTAATCCAACTACTGGGGAAGGGCATGAAAATTCATGTCGTGGAGGTGTTAGGAAAGAGTTAAATGCTTTATTTTCATCCCATTGCTCCATTGTTACATCTCAATTGTCTGGAGGTTTTTCAATTGATCAAAATCCTGAGAAGATAGGATCATTCTCAGACAGCAATGCAGAAGTAGAAGATCAGCTAAGCACAGCCGAATACAATTTTTCCAACAGTACTTCTTTCAGTAAGCTTCTAGGAATGGCAAGTTCAACCCAGGTACATGAAGTTAACAGTCAGAGAAGCAATCCAACTGAGAGTTTGAGAGATTCATACGGTCAATCTGCAGCTATGAGGCATGACAACCTGGAACAGAACATGGAAAAATCAAATGTTACTCAAAGCTCCTTAGAAGCAATCGTGGCACAATGCAATGACTATAGTCTGAAAATGACCCCCAACTCTGGAGTCCTAGAACTCAACTGCTATAATCCTGTCAATTTTGAAGCCTCATCAAGTGGCTCCTCAATGAATAACATAAGCTCGAGTTCTCCAACAGAGTCTCACAGCATGCTATCCCAAGTCCATCTTCAGCAACAGAGTGATCACAAACAGCACAAGGCTTTCCACATTTCTGGACAAAGTCAAGATCTTATGCAGAAATCAAGGGAACCAGATTCTGGTGACCACAATTATGCTATGACGAATGAAAACAGTAAGTTAGATTCTGCCCCTGTAAAATCAAAAGGCAAGGAGCGCGTGAAAGAGAAAAAGGATAACTTCAATTGGGATAGTTTAAGAATACAGGCACAGGCTAAGGCAGGGAAGAGAGAAAAGACGGAAAGCACCATGGACTCTTTGGACTGGGATGCTGTAAGACGTGCAAACGTAAATGAAATTGCCGATGCAATCAAAGAAAGGGGCATGAACAACATGCTCGCTGAACGTATTCAGAGTTTCTTGAATCTACTTGTTGAAAAACACGGGGCAATTGATCTCGAGTGGCTGAGAGATGTTCCACCTGACCAAGCAAAAGAATTCTTGCTCAGCATAAGGGGATTGGGATTGAAAAGTGTGGAGTGCGTGCGACTATTAACACTGCACCATCTTGCTTTCCCGGTGGACACAAATGTTGGACGTATTGCAGTGCGATTGGGATGGGTACCTCTCCAACCACTGCCTGAGTCACTACAGTTGCATCTTCTAGAATTGTACCCAGTGTTGGAATCCATACAAAAATATCTCTGGCCCCGACTGTGCAAGCTTGACCAAAAAACATTGTACGAGCTGCATTACCAGCTGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGTCCAATGAGAGGGGAATGCAGACACTTTGCAAGTGCTTTTGCAAGTGCAAGGCTTGCCCTCCCAGGACCAGAGCAGAAGAATATAGTTATCTCAGGTGGAAACAATGCAACTGATCAGAACCCATCAGTAATCATCAATCAGTTGCCCCTGCCTCTCCCAGGACCGGAGCAGAAGAATATCGATATTACAACTGGAAACAATGTAGCTGATCAGAACCAATCAGTAATCATCAATCAATTGCCCTTTTCTATCACTGAAAACACAAACCAAGCAGAAGAACATCATCAGACAGTAATGATCAGGCAACTTGGAACGAACTCTGAAATCGATATTTGCCAACCCATTATTGAAGAGCCAGCAACTCCAGAACCAGAATGCTCTGAAGTATTTGAAAATGATATAGAGGATGCTTTCTATATGGATTCAGATGAAATTCCAACCATCAAACTAGACATAGAAGAGTTCACTACGAATTTACAAAATTATATGCAAGAAAACATGGAACTTCAAGAAGGTGAAGTGTCAAAGGCCTTGGTTGCTCTAAATCAAGAAGCTGCCTACATTCCTACACCGAAGCTAAAGAACGTCAGCCGGTTGCGCACAGAGCATTCTGTTTATGAACTCCCAGATACACATCGTCTTCTGGAAGGGTGGGAAAAGCGAGAACCTGATGATCCTGGCAAATACCTTCTAGCTATCTGGACTCCAGGTGAGACAGCAAATTCTATTCAACCACCGGAAGGAAAATGCAGCGCTCAGGAACGTGGCCAGCTCTGTAATGAGGAGGAATGCTTTTCGTGCAACAGTTTCCGTGAAGCTAATTCACAAATAGTTCGAGGGACTATCCTGATACCATGTCGAACAGCTATGAGAGGGAGCTTTCCGCTAAACGGCACCTATTTTCAAGTCAATGAGGTTTTCGCAGACCATGAATCAAGTCTTAACCCGATCAGTGTTCCCAGAAGTTGGATATGGAACCTCAATAGGAGAACAGTGCATTTTGGAACCTCCATACCAACCATATTCAAAGGTTTAACAACACCAGAAATTCAACAGTGCTTCTGGAGAGGGTTTGTCTGTGTGCGAGGATTTGACAGGCAAACACGAGCACCCCGTCCTTTGAAAGCTAGACTACATTTCCCAGCTAGCAAATTGGCCAAGACCAAGGAGAAGCCAAAAAACGACTCCACGGCCGCAAACACACAAGGATTGAATTCAAAACAAAATGCAGACCAGCCAGAATTTCTTGCTAGCATTCCCAACTTGCGACAGAATGGCGGATCCTGA 5307 0.4193 MEFGETEKKELNSKVQWIPTTPFKPIAQRPVPICNSGERNQLNSHFNGEFSCNETLSGGDVNNLSETVAVASDIGGDNARTRVQISFDDNVPSSSNSFAELLAQAEAAPSSSYSNASYGFPGNQFVPGVWNSQFNQNYAFLYQQQPFLNLIHNGYQDPQGTPYLGYYDKTNSQVALPPENNTTSKDKQVVETQICMDQREDENNASATMCNNSQNKLYDPVIDLNAVSTPCKENNNHNKEIHHAIDLNEIPQTKPKRRKHRPKVIKEGKPKKTPKPPTPKPDQSKENSTQKRKYVRKKESNATPAEVTGECTEPLMSESAKKTCRRSLIFDIPEQPRDENSACREENATTCFGGEIGIEVQETHALQEDAQASSSNGKLSNTGSQEVRSKRKLSGTAEQADSSSINMIGAQYNLMQAYQSKYWAQFPNVQKKKRSEKGKFSNTSNTSSMAAIKDVQLARCSEENARSHPDASTSNGWTTASASEYETARLLTMLATETATYDKSQSLEYNLFSGQSRPTKKRSRVTTRIQDCTSLTIIRNCDAKLTNIASLGSSDRQTFEDAERPQTGIDALVAEMRASLTKKKRSKKRSASISSAYSRINEMQHQPLQNSLGVACGESWKSVPTVDTLTQQFRHLNIYREARELVLCEQNALVPYNRQNEKHKGQVHKYGTIIPFEGVFDPIKKQRPRPKVDLDEETNKVWKLLMLDINSHGVDGTDEDKAKWWENERNVFRGRAESFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPLKSSSNFDTCHEESASMIVNTPEVQIVEPEENAKLEDIILNQSVHELSSMTKDIIEHSEERETVDSNSIDSCGTTGSLNSLKDESNCKLSEPAQSNIREHGTMEFVNPTTGEGHENSCRGGVRKELNALFSSHCSIVTSQLSGGFSIDQNPEKIGSFSDSNAEVEDQLSTAEYNFSNSTSFSKLLGMASSTQVHEVNSQRSNPTESLRDSYGQSAAMRHDNLEQNMEKSNVTQSSLEAIVAQCNDYSLKMTPNSGVLELNCYNPVNFEASSSGSSMNNISSSSPTESHSMLSQVHLQQQSDHKQHKAFHISGQSQDLMQKSREPDSGDHNYAMTNENSKLDSAPVKSKGKERVKEKKDNFNWDSLRIQAQAKAGKREKTESTMDSLDWDAVRRANVNEIADAIKERGMNNMLAERIQSFLNLLVEKHGAIDLEWLRDVPPDQAKEFLLSIRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQKTLYELHYQLITFGKVFCTKSKPNCNACPMRGECRHFASAFASARLALPGPEQKNIVISGGNNATDQNPSVIINQLPLPLPGPEQKNIDITTGNNVADQNQSVIINQLPFSITENTNQAEEHHQTVMIRQLGTNSEIDICQPIIEEPATPEPECSEVFENDIEDAFYMDSDEIPTIKLDIEEFTTNLQNYMQENMELQEGEVSKALVALNQEAAYIPTPKLKNVSRLRTEHSVYELPDTHRLLEGWEKREPDDPGKYLLAIWTPGETANSIQPPEGKCSAQERGQLCNEEECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHESSLNPISVPRSWIWNLNRRTVHFGTSIPTIFKGLTTPEIQQCFWRGFVCVRGFDRQTRAPRPLKARLHFPASKLAKTKEKPKNDSTAANTQGLNSKQNADQPEFLASIPNLRQNGGS* 1769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 1062 1145 - -
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 236 318 - -
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 269 300 - -
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 254 268 - -
Tpr6g0778 1768 Pfam RRM in Demeter 1620 1720 IPR028925 -
Tpr6g0778 1768 SUPERFAMILY DNA-glycosylase 734 1351 IPR011257 GO:0003824|GO:0006281
Tpr6g0778 1768 Coils Coil 1492 1512 - -
Tpr6g0778 1768 SMART endo3end 1156 1328 IPR003265 GO:0006284
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 236 253 - -
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 1062 1087 - -
Tpr6g0778 1768 PANTHER ROS1, PUTATIVE-RELATED 1107 1393 - -
Tpr6g0778 1768 PANTHER ROS1, PUTATIVE-RELATED 1 348 - -
Tpr6g0778 1768 PANTHER ROS1, PUTATIVE-RELATED 367 1090 - -
Tpr6g0778 1768 PANTHER ROS1, PUTATIVE-RELATED 1390 1735 - -
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 1735 1768 - -
Tpr6g0778 1768 Gene3D - 1251 1367 IPR023170 -
Tpr6g0778 1768 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1 348 IPR044811 GO:0019104|GO:0035514|GO:0080111
Tpr6g0778 1768 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1390 1735 IPR044811 GO:0019104|GO:0035514|GO:0080111
Tpr6g0778 1768 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1107 1393 IPR044811 GO:0019104|GO:0035514|GO:0080111
Tpr6g0778 1768 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 367 1090 IPR044811 GO:0019104|GO:0035514|GO:0080111
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 1720 1768 - -
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 460 479 - -
Tpr6g0778 1768 Pfam Permuted single zf-CXXC unit 1586 1617 IPR028924 -
Tpr6g0778 1768 MobiDBLite consensus disorder prediction 368 402 - -
Tpr6g0778 1768 Gene3D Hypothetical protein; domain 2 1153 1250 - -
Tpr6g0778 1768 SMART ccc3 1329 1349 IPR003651 GO:0051539
Tpr6g0778 1768 CDD ENDO3c 1176 1294 IPR003265 GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0778 Tpr-Chr6 6573895 6583856 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0778 - - mtr:MTR_7g103680 2749.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0778 6 6573895 6583856 Tpr6g0778 6 6573895 6583856 ECH
Tpr6g0778 6 6573895 6583856 Tpr1g4217 1 48946165 48956901 PCT