Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4217 ATGGAGGTTGAAGAAATGAAGAGAAAGGAGCCGCAAGCAGAGATTCCATGGATCCCTACAACCCCTGTTAAGCCGGTTGTACCAAAATCAGCTCCGATCTGTACTCCAGTGGAAGGAAACAGCCAAATCTACCATCAAGCTAATGGAGCATTTGCATGTTCTGAATTCCCACATGGAACAGAGAAAAACAGAGAATCCCATGATGGGTCAGTACCTGCGGCTACAATTACAGACATTGCAGGTGAAAATGGCAAAATCTGTGACAAGACAGCTTCTGATAATGTTTCATGTTGGAGTGGTTTAGGTTCTGCCGAATTTGTGTTTCGGACAGAGGTAGCTTCGTCGAGTGCAACACGAATAGGAGACAATAATGGATTGAATGATCTAGTTGTTCCTTCAGTTGTCTCTGAGAATTCAAGAGATCCTCATGAAACATCTGACATTGCTTGTTGTAGCAAGAGAACTTCCCAGGATGATCCTGCCAAAAAGCTTGACAAGGATGGAACCCCACCGGACAAAGAACTTTGTGACCCTGCTGTAGAATTTGCTGCTGTTTCTTCAGCGTTGATGGAGAATCACAACCCAGATGAAGGAAGCAGCCTCTGTACAGGCCTAAATAAAACACCAGAAAAAAAGCCAAGGAGAAAAAAGCATCGTCCCAAGGTCATTAGAGAAGGAAAACCCAAAAGAACTCCGAAGCCAGCTACCCCAAAGCCTGCTCCATCAAAAGAAAACACAACTGGCAAGAGGAAGTATGTCAGAAGAAAAGAATTGAAAAAAACTTCTACTCCAGCAGAAGTGACAGGAGAAATCGCTGAAGAAACGCCTGAAGCTGCCAAAATGTCATGTCAAAGATCCTTAAATTTTGACACAGGAACAAAAGACGAGAGCTCTGCAGGCAGAGAAAATATAACTGCACTTCTAGGAAAAGAAAATGGTGTAGCCGCACAAGAAACCAATTTCGGCCTTATTTGTGATTTAAACACTTCAGTTAATGTTAAGCATGCATCAAACAGTTCCATGTCATTACCAGAAGAGACACATGAGACAAAGCCAAAAGAAAACCCAACTGGCAAGAGGAAATATATAAGAAGGAAATTGAACAAGACTTCGGCTCCTCCAGCAGAAGTTACAGGTGAATTGACTACAGAAAAGATGCCCGAATTGGCCAAACCGCCCTGTAAAAGTTGCACAAATTTTGACAAAGGAGGAATGGAAGAGAGTTCTGCAGTCAAAGAAACTGCAACTGCACATCTGAGCGAAGAAAATGTAGTCACCGAGGGAACAAATCCAGATCTTGCATATGATGTAAAAACTCCTATGAAGCAGGCATCAGACAGTAATGTGTCTTTAACAGAAGATACGCAAACCATAAATAAATCGTCAAGAAGAAAAAAGCTAAAAGAAGGCCCAATTACCAAAAGGCAGTATGAGAGAAGGTCAAAATTGAACAAGTCTTCCACTCCTACTACAGAAGTATCCGGAGACTTGCCTGGAAAAACGATGCCAGAATCTGCCAAAACTTCTTGTCAGAAGTCCTTAAATTTTGACAGAGGAGCAAGAGATGAAGGTTCTGCCGACAAAGAAAATGCAACTGTGCATCCATGCAAAGAAACTGGTGCAGCAATTCAGGAAATTGAGGTAGGCTTTGGCTATGATATGGAGAGTTTCATGAAGCAGGCAGGAGAAAATAATTACCTGTCATTCTGTAATGATAAACAAACCCCAACTGTGCGTCCATGCGAAGAAACTGGTGCAGTAGTGCAGGAAATTGATGTATGCCTTGACTATGATATGGAGACTTTCATGAAGCCAGCAGCAGAAAATAACTACATGTCATTTTGTAATAATGAACAAACCACAAGTACATCTCCTTCAAAAACCAATCCCCCAGGGGAAAAGCCAAAACAAAACCTGACTGGAAATAAATATCAGAGAAGAAAACGATTGAACAAGTCGCCTACTTGTCAAACAGAAATGACAGGAGAAGATACTGGAGCAATGATGCCAGAATCTAAAGCAACGCCGATGAAAAGGTTCTCAGATGTTGACATGGGAGTGAAAGATGAAAGTTCTGCACGCAAAGAAATTGTAAATGTGCAAATGGGCGATTTGGTAGAGGAAACGCCTGTAAGCCTTGCCTACAATCAAGATACTTGGATCAAGCAGGCATTAAATAGTTACATGTCTGGAGACGCACAAGCCCCAAGTACAGATCCTTCAAAAGATAATCCTCCTGGAGAAAAGCCAGAAGAAAACCCAAATGGCAAGAGGAAGTGTGTGAAAAAGAAGAGATCGAAGAGGACTTCTCCAAGAGAAATGACAGATGAATTAACTGAACCAATTATGTCTGAACCTACCGTAATATCGTGTAGAATGTCCATAAACTTTGACAATGGAGGAAGAGATGAAAGTAATATGTGCAATGAAAGCCTCGCCAGCGATCAAAACACCTTGGTGAAAGAGATGTCAAATAGTCACATGTCATTATCTGAAAACACACAAGCTCCAAGTGCATGCCTTCCAAAAAGCAATCCTCCTGGGGCGAAGCGGAATCCCAGCAACAAAAACAAAAGAAAAGGCCTCCCAACGGCTGAGGATGGAAACATCAGTAACGGTCAAGTTTCAACAATAGAGTCACAGATGGTTGGTTGCGAGAGAGAGCATTCTGGAACCACTGAACTGGCAGATAACAACAACATGAATCTGATTGGGGCACACTATAATGGACTGCACTCATACCAGTCAAAGTTTCCGCTTCAATTTCCAAATATCCAGAAGAAAAAGAGAACTGAAAAGGAGAAAACTAACACTTGTATTACATCTTCTGTGATTGCCGAAAATGGAGTACCACTAATGTTCTCTCCCCAATATGCGCAAGTGCATCCTTATGCATCAAACTACAATTCCTGGATGTATGGTTCTGGATATAATACAGCTGTAATTCCCATGATAAATGAATGTACAGAAAATTATATTCATAATACTCAAACATTTGACGAGTTCAGATTATCTTTGAGAAGGGTGACTGAAAGATCTCAATTTGAAGCTCAAACTTCTGATTACAATTCTCATTATAATTCTCTAATGAGAATTAGAAGCTGTGTTGAACCAGATTATACTGCAAAACAACTGGAATTTTCAGACCGGCAAACAATTAGAGATGCAGAAAGACCACAAACATGCATTGATGTCTTAGTTGAGGATATGCCTGTATCATGTGCAAAAAAGAAGCAAAATAAAAAGAGAAGTGTTATTTCCAGTTCAGCACATCCTAACACAGATGAGATGCAACAGTGCCATAATTTTGCATTGGTAAATCACAACCTGGCGCAAGGAAAGTCATCAGATACTGCTCGTAGACGGAAAAAAGCTCGTGATGTTGAAGCATTAACAGCGCAATTTAGACGGCTAAACATAAACACAGGAGAGAAGGACCTTGTCTTATATAAGCAGAATGCACTTGTTCCCTTTCAGGGCTCATTTGATCCGATCAAAAAACAGCGTCCACGACCTAAAGTTGACCTTGATGAGGAGACTGATAGAGTGTGGAAGCTTTTGCTGTTAGATATAAACCATGAAGGGGTTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAGAAGAACGTAATGTGTTCCGTGGACGAGCGGAATCATTTATAGCCCGGATGCATCTTGTACAAGGTGACAGACGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTGGTAGGAGTTTTCCTCACTCAAAATGTATCAGACCATCTTTCCAGTTCTGCATTCATGGCCCTTGCTGCTCGATATCCCAAAAAGTCAGGCAGCACGAGCACAGCATATGACGGAGAAGGCACAAGCCTGGTGAATATAGTGGAACCAGAAGAGAACACAGAATGTGATGTAAAGTTATTGAATCAATCTGTTTGCAACCAGAGTTCTATGACAGTAGATATAGTTGAGCATTCTGGCAATGATTCCTGCAGAATTACGAGTAGCCCAATCAGCTTAACAGATGAATCAAACTGCAAACTAACAGAATCACCTCAAACAAATATTACAGAATGTCACAGTCCAATGGTTATGATTGAGGAAGGGGAAGAAAAATCACGTTATGGTGGTAGGAAAGAGCTTAATGACATAGTTTCATCCCAATCCTCTGTCATTTCATTTCAAATATCTGGAGATTTTTCAAATGATCAAAATCCTGAGAAGATTGGATCATGCTCAGATAGCAACTCAGAAATTGAAGATCTGTCAAGCACAGCAAAGTACAACGGTTGTGGTTCCTTCAGTAAGCTTCTAGAAATGGTAAGTTCAACCAAGTTTTATGAAGTTAACAGTCAAAGAAGCGAATCAACTGAGAACATGAGAAATGGAAATGCAATAGAAAGCTCTTTCCCACCCCACAACTCAGGAGCTCGTGAAGTTAACTGCCCTGATCCTTTCAAAACAGAAGCTTCGTCAAGTGGCATCTTAAAGAATAAAGACGGAAATGAGATGAATATGCCTAGTTTTCAAATAGCCGAGTCTGCAGGCTATGTTGCAGTTACTCATTCTCCAACTATTGCATCTCAAGTCCATCCTCAGGAACAGAGTAATCACATGCAGCAGCAAAGCTTTTTCAACATTTCTGGACAAACTCATGATCTGGTTCAGAAAGAAAGGAATTTAAATCTTGGTGACCACAAAGAAGTTGTGAGGAGTGAAACCAATGAGATAAGTTCTTCCCCAATAAAACCAAAGAGCAAAAGTCAAGTACAGGAGGAAAAGGACAATTTTGACTGGGATAGTTTACGAATAAAAGCACAAGCTAAGGCTGGGAAAAGAGAAAAGACAGAAGACACCATGGATTCTTTAGACTGGGAGGCCCTGAGATGTGCAGATGTTGGTGACATTGCTAATACCATCAAAGAACGGGGCATGAACAACAGGCTTGCCGAGCGGATTCAGAAATTCCTGAATAGAGTGGTTGAAGATCATGGAAGCATTGACCTCGAGTGGCTGAGAGACGTACCACCTGACCAAGCAAAGGAATATTTGCTGAGCGTAAGAGGACTGGGATTGAAAAGTGTGGAGTGTGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCGGTAGACACAAACGTTGGACGTATAGCAGTACGCTTGGGGTGGGTACCACTCCAGCCACTGCCAGAGTCACTGCAGTTGCATCTCCTAGAAATGTACCCAGTGTTGGAGTCGATACAAAAGTATCTCTGGCCTCGATTGTGCAAGCTAGATCAAAAAACATTATATGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGTAAACCAAATTGTAATGCATGCCCAATGAGAGCAGAATGTCGACACTTTGCCAGTGCATTTGCGAGTGCAAGGCTTGCCCTGCCTGGACCAGAGCAGAAGAATATAGTTAGTGTAGCTGGAAATATTGCGGCTGATGAGAACCCACCTGTAGTCATGAGTCAGTTGCCCTTGCCTCTTCCTGGGAACACAAATCAAGTGGAAGAAATTCCCCAAACAGAAGTGAGCGGACAACTGGCAAAATTTGAAGTAAATATCTGCCAACCTATCATTGAAGAGCCGGCAAGTCCAGAACCAGAATGTCCTCAAGTTGAACTAAGTGATATAGAGGATTCCTTCTATGATGACAAGTGTGAAATTCCGACCATTGAACTTAACATAGAGGAGTTCACTCTGAATTTACAAAACTATATGCAAAGAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCTCTGGTTGCTTTGAATACACAAGCTGCATCCATTCCTGTGCCCAAGCTAAAGAATGTTAGCCGATTACGAACAGAGCATTGTGTTTATGAACTCCCGGATAATCATCCTCTTCTGGAAGGGTGGGAAACACGAGAACCTGATGATCCTGGCAAATATCTTCTTGCTATATGGACTCCAGGAGAGACAGCAGATTCCACACAGGCGCCGGAATGCAAATGCAGCTTTCACGAAGAATGTGGACAGCTCTGCAACGAGAAGGAATGTTTCTCTTGCAACAGTTTCCGAGAAGCAAATTCACAGATAGTTAGAGGCACACTTCTGATACCATGTCGAACAGCTATGCGTGGGAGTTTTCCACTAAATGGCACCTATTTCCAGGTGAACGAGGTATTTGCTGACCATGAGTCCAGCCTTAATCCTGTTAGTGTTCCCCGAAGTTGGATCTGGAACCTCGGTAGACGAACGGTATATTTTGGAACCTCCACAACGTCAATATTTAAAGGTTTAACAACACAAGAAATTCAACAGGCCTTTTGGAGAGGATATATCTGTGTACGAGGATTTGAAAGGAAAACGCGGGCACCCCGCCCTTTGATGGCTCGACTGCACTTTCCAGCTAGCAAATTGGCCCAAGCCGCCAAAGAGAAGGCGAAGGAGTCAAGCCCGGCGAAGAACTCACAAGTACCTAAACCGAATCCTGAAATTACGGCAAAGAAATCACGAGGACCGAAACCAAACTCTGAAAGTACGACGAAGAAATCACAAGTACCGAAACCAAATGCTGATAGTCTGGCGGAGAAATCACCAGAACCGAAACCAGATTCTGAACAACCTGAACTGATTTTGAACAGTCACAGCCTTCAGGAGATAGGAACAGCATGA 6669 0.422 MEVEEMKRKEPQAEIPWIPTTPVKPVVPKSAPICTPVEGNSQIYHQANGAFACSEFPHGTEKNRESHDGSVPAATITDIAGENGKICDKTASDNVSCWSGLGSAEFVFRTEVASSSATRIGDNNGLNDLVVPSVVSENSRDPHETSDIACCSKRTSQDDPAKKLDKDGTPPDKELCDPAVEFAAVSSALMENHNPDEGSSLCTGLNKTPEKKPRRKKHRPKVIREGKPKRTPKPATPKPAPSKENTTGKRKYVRRKELKKTSTPAEVTGEIAEETPEAAKMSCQRSLNFDTGTKDESSAGRENITALLGKENGVAAQETNFGLICDLNTSVNVKHASNSSMSLPEETHETKPKENPTGKRKYIRRKLNKTSAPPAEVTGELTTEKMPELAKPPCKSCTNFDKGGMEESSAVKETATAHLSEENVVTEGTNPDLAYDVKTPMKQASDSNVSLTEDTQTINKSSRRKKLKEGPITKRQYERRSKLNKSSTPTTEVSGDLPGKTMPESAKTSCQKSLNFDRGARDEGSADKENATVHPCKETGAAIQEIEVGFGYDMESFMKQAGENNYLSFCNDKQTPTVRPCEETGAVVQEIDVCLDYDMETFMKPAAENNYMSFCNNEQTTSTSPSKTNPPGEKPKQNLTGNKYQRRKRLNKSPTCQTEMTGEDTGAMMPESKATPMKRFSDVDMGVKDESSARKEIVNVQMGDLVEETPVSLAYNQDTWIKQALNSYMSGDAQAPSTDPSKDNPPGEKPEENPNGKRKCVKKKRSKRTSPREMTDELTEPIMSEPTVISCRMSINFDNGGRDESNMCNESLASDQNTLVKEMSNSHMSLSENTQAPSACLPKSNPPGAKRNPSNKNKRKGLPTAEDGNISNGQVSTIESQMVGCEREHSGTTELADNNNMNLIGAHYNGLHSYQSKFPLQFPNIQKKKRTEKEKTNTCITSSVIAENGVPLMFSPQYAQVHPYASNYNSWMYGSGYNTAVIPMINECTENYIHNTQTFDEFRLSLRRVTERSQFEAQTSDYNSHYNSLMRIRSCVEPDYTAKQLEFSDRQTIRDAERPQTCIDVLVEDMPVSCAKKKQNKKRSVISSSAHPNTDEMQQCHNFALVNHNLAQGKSSDTARRRKKARDVEALTAQFRRLNINTGEKDLVLYKQNALVPFQGSFDPIKKQRPRPKVDLDEETDRVWKLLLLDINHEGVDGTDEDKAKWWEEERNVFRGRAESFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAFMALAARYPKKSGSTSTAYDGEGTSLVNIVEPEENTECDVKLLNQSVCNQSSMTVDIVEHSGNDSCRITSSPISLTDESNCKLTESPQTNITECHSPMVMIEEGEEKSRYGGRKELNDIVSSQSSVISFQISGDFSNDQNPEKIGSCSDSNSEIEDLSSTAKYNGCGSFSKLLEMVSSTKFYEVNSQRSESTENMRNGNAIESSFPPHNSGAREVNCPDPFKTEASSSGILKNKDGNEMNMPSFQIAESAGYVAVTHSPTIASQVHPQEQSNHMQQQSFFNISGQTHDLVQKERNLNLGDHKEVVRSETNEISSSPIKPKSKSQVQEEKDNFDWDSLRIKAQAKAGKREKTEDTMDSLDWEALRCADVGDIANTIKERGMNNRLAERIQKFLNRVVEDHGSIDLEWLRDVPPDQAKEYLLSVRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYPVLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMRAECRHFASAFASARLALPGPEQKNIVSVAGNIAADENPPVVMSQLPLPLPGNTNQVEEIPQTEVSGQLAKFEVNICQPIIEEPASPEPECPQVELSDIEDSFYDDKCEIPTIELNIEEFTLNLQNYMQRNMELQEGEMSKALVALNTQAASIPVPKLKNVSRLRTEHCVYELPDNHPLLEGWETREPDDPGKYLLAIWTPGETADSTQAPECKCSFHEECGQLCNEKECFSCNSFREANSQIVRGTLLIPCRTAMRGSFPLNGTYFQVNEVFADHESSLNPVSVPRSWIWNLGRRTVYFGTSTTSIFKGLTTQEIQQAFWRGYICVRGFERKTRAPRPLMARLHFPASKLAQAAKEKAKESSPAKNSQVPKPNPEITAKKSRGPKPNSESTTKKSQVPKPNADSLAEKSPEPKPDSEQPELILNSHSLQEIGTA* 2223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4217 2222 SMART endo3end 1601 1773 IPR003265 GO:0006284
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 2171 2187 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 135 175 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 441 457 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 824 870 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 1567 1593 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 458 482 - -
Tpr1g4217 2222 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 349 460 IPR044811 GO:0019104|GO:0035514|GO:0080111
Tpr1g4217 2222 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 460 660 IPR044811 GO:0019104|GO:0035514|GO:0080111
Tpr1g4217 2222 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 154 349 IPR044811 GO:0019104|GO:0035514|GO:0080111
Tpr1g4217 2222 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 741 2149 IPR044811 GO:0019104|GO:0035514|GO:0080111
Tpr1g4217 2222 Gene3D - 1673 1802 IPR023170 -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 618 689 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 192 206 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 618 639 - -
Tpr1g4217 2222 CDD ENDO3c 1621 1739 IPR003265 GO:0006284
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 731 785 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 516 533 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 2138 2222 - -
Tpr1g4217 2222 SUPERFAMILY DNA-glycosylase 1216 1796 IPR011257 GO:0003824|GO:0006281
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 210 226 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 441 533 - -
Tpr1g4217 2222 Pfam RRM in Demeter 2033 2133 IPR028925 -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 2208 2222 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 744 758 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 824 841 - -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 336 387 - -
Tpr1g4217 2222 Coils Coil 1904 1924 - -
Tpr1g4217 2222 SMART ccc3 1774 1794 IPR003651 GO:0051539
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 192 267 - -
Tpr1g4217 2222 Pfam Permuted single zf-CXXC unit 1998 2030 IPR028924 -
Tpr1g4217 2222 MobiDBLite consensus disorder prediction 156 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4217 Tpr-Chr1 48946165 48956901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4217 - - mtr:MTR_1g061220 3250.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4217 1 48946165 48956901 Tpr1g4217 1 48946165 48956901 ECH
Tpr6g0778 6 6573895 6583856 Tpr1g4217 1 48946165 48956901 PCT