Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0745 ATGGCAAGAATGTCTCAAGAACCACTTATTGTTGGGAGAGTGATAGGTGAAGTTCTTGATTTCTTCACCACAAGCATGAAAATGACTGTGAGTTTCAACAAGAAACAAGTCTTCAATGGTCATGAGTTTTTCCCTTCCACTATCAACATCAAGCCAAAAGTTGAGATTGATGGTGGTGACATGAGATCCTTCTTCACACTGGTGATGACTGACCCTGATGTTCCTGGCCCTAGTGACCCTTATCTGAGAGAACACTTGCACTGGATTGTGACAGATATTCCAGGAACAACAGATGCTACATTTGGGAAAGAAGTGGTAAGCTATGAAATACCAAAGCCAAATATTGGAATCCACAGGTTTGTGTTTGTTCTGTTCAAACAAAAAAGCAGAGATTCAGTGACAGTAACACCATCTTCAAGGGATCATTTCAACACTCGCAACTTTGCTTCACAGAATAACCTTGGTCTTCCTGTTGCTGCTGTTTACTTCAATGCTCAGAGAGAAACTGCTGCAAGAAGACGCTAG 525 0.4152 MARMSQEPLIVGRVIGEVLDFFTTSMKMTVSFNKKQVFNGHEFFPSTINIKPKVEIDGGDMRSFFTLVMTDPDVPGPSDPYLREHLHWIVTDIPGTTDATFGKEVVSYEIPKPNIGIHRFVFVLFKQKSRDSVTVTPSSRDHFNTRNFASQNNLGLPVAAVYFNAQRETAARRR* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0745 174 CDD PEBP_euk 26 165 IPR035810 -
Tpr6g0745 174 Pfam Phosphatidylethanolamine-binding protein 49 163 IPR008914 -
Tpr6g0745 174 SUPERFAMILY PEBP-like 13 168 IPR036610 -
Tpr6g0745 174 PANTHER PROTEIN TERMINAL FLOWER 1 3 173 IPR031114 GO:0003712|GO:0009910
Tpr6g0745 174 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Tpr6g0745 174 Gene3D - 1 174 IPR036610 -
Tpr6g0745 174 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 3 173 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0745 Tpr-Chr6 6177523 6179257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0745 K06910 - pvu:PHAVU_001G189200g 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0745 6 6177523 6179257 Tpr6g0745 6 6177523 6179257 ECH
Tpr6g0745 6 6177523 6179257 Tpr1g4325 1 50440432 50447197 PCT