Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4325 ATGGGAAGTATCACTTCAGATCCTCTAATTATTGGGGGAGTGATAGGAGATGTTATTGATGATTTCACCCCAACCATAAAAATGACCGTAACTTACAACAACAAAGAAATCTTTAATGGATATGAAGTACCCTTTCCTTCTACAGTTGCCACCAAGCCAAGGATTCAGATTGGAGGAGGGGACATGAGGTCCCTCTTTACACTGATCATGATAGATCCGGATGTTCCTGGCCCAAGTGATCGTTATATGAAAGAACACTTGCACTGGATGGTGACCGACATTCCAGGGACCACAGATTCCACATTTGGCAAAGAGCTGACAAGTTATGAAAAACCAAAGCCTAATATAGGAATCCACAGGTATGTATTTGTCCTTTTCAAGCAAGAAAAGGGGAAGAAGCACTCAATTACTCCTCCTTTTTCAAGAGATCACTTCAACACACGAACTTTCTCTGCTCAAAATTACCTTGGTGTCCCTGTTGCTGCTGCTTTTTTCAATGCTAGAAGGGCAACTGCTCAAAGGAGACGTTAG 531 0.4218 MGSITSDPLIIGGVIGDVIDDFTPTIKMTVTYNNKEIFNGYEVPFPSTVATKPRIQIGGGDMRSLFTLIMIDPDVPGPSDRYMKEHLHWMVTDIPGTTDSTFGKELTSYEKPKPNIGIHRYVFVLFKQEKGKKHSITPPFSRDHFNTRTFSAQNYLGVPVAAAFFNARRATAQRRR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4325 176 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 4 175 IPR035810 -
Tpr1g4325 176 PANTHER PROTEIN TERMINAL FLOWER 1 4 175 IPR031114 GO:0003712|GO:0009910
Tpr1g4325 176 SUPERFAMILY PEBP-like 13 168 IPR036610 -
Tpr1g4325 176 CDD PEBP_euk 27 160 IPR035810 -
Tpr1g4325 176 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 66 88 IPR001858 -
Tpr1g4325 176 Pfam Phosphatidylethanolamine-binding protein 50 163 IPR008914 -
Tpr1g4325 176 Gene3D - 2 176 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4325 Tpr-Chr1 50440432 50447197 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4325 K06910 - gmx:100787529 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4325 1 50440432 50447197 Tpr1g4325 1 50440432 50447197 ECH
Tpr6g0745 6 6177523 6179257 Tpr1g4325 1 50440432 50447197 PCT