Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0705 ATGGTAATTTTAATTTCCACTATCGGCAAAACCATAACAACCGATGAAGAAGGTGGCGCCGCTACCATCTCCGCCATACATCCAGATATCATTCAAACTCATATCCTCACGTGCCTCGACGGTCCTTCACTCGCTTCCGCATCAAGCACGTGCTCTCAGCTTAATAACCTCTCATCAAACGAGCATTTATGGAACAAAATTTGCCACTCCACGTGGCCTTCCACAAACACGACACGCGTCCGTCATGTAATTTCCACTTTCCCTAACACATCTCGCTCTTTCTTCTCCGATTCTTTCTCAACCGTAACCGCTAACACCTTACACCACCGCCACCACCACCACCGTACAAATCTCGAAACTACACCGGAAATTTTATCCGCTGTTGATTTATTTCACCGGAAACGGCTTATTTTATCGAAAGTGGTGGAGACAGAGACTGTTTCTGGCTGGTTTAGATGTTCTCCGTTTCGGATTGATATTCTTGATCCGAAGGATTCGGTTGAGACGAGTATGGAGTATCCGAGAAACGATGAAGAGTGTAAGAATCTGGAAGAGGAATTGAGATTGAGTTGGATCGTGATTGATCCGAGAGGGAAGCGTGCGGTGAATGTTTCGAGTGGGAAACCGGTGTCGGTTCACCGTCACTGGCTTACCGGAGATGTGCATGTGAAATTCGCGACGGTGTTACACGGCGGAGAGAAAGGATCGGCGACGGAAGTGACGGTTTGTAGTTTATTGGTAACTTTGGGAGGGGAAATGCAAGTGAGGGAAGTTTGTTTTCAGGTTGAGGATATGGATGGGATTAATTTAAATGGGAGGGATAGTTTGGGGATTTTACAAAAGGCTTTGGAGGGTGGAAGAAAAAGATTAAGGAGCGAAAAGGAAGGAAAGGAAAGATTCGTGGAATTTATGAAAAGGAAAATAGAAAGGAAAGAGAGGAAATTGAGAAGTGAAAGAAGGTTGGATATGCTTTGCGTAGGTCTCGCTGCTTTGTCTGTTGCGGCTTTTTCCACTCTCTTTCTCTCCTGA 1029 0.4548 MVILISTIGKTITTDEEGGAATISAIHPDIIQTHILTCLDGPSLASASSTCSQLNNLSSNEHLWNKICHSTWPSTNTTRVRHVISTFPNTSRSFFSDSFSTVTANTLHHRHHHHRTNLETTPEILSAVDLFHRKRLILSKVVETETVSGWFRCSPFRIDILDPKDSVETSMEYPRNDEECKNLEEELRLSWIVIDPRGKRAVNVSSGKPVSVHRHWLTGDVHVKFATVLHGGEKGSATEVTVCSLLVTLGGEMQVREVCFQVEDMDGINLNGRDSLGILQKALEGGRKRLRSEKEGKERFVEFMKRKIERKERKLRSERRLDMLCVGLAALSVAAFSTLFLS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0705 342 Gene3D - 16 117 - -
Tpr6g0705 342 SUPERFAMILY F-box domain 28 93 IPR036047 GO:0005515
Tpr6g0705 342 Pfam F-box-like 28 68 IPR001810 GO:0005515
Tpr6g0705 342 PANTHER F-BOX PROTEIN-RELATED 11 336 IPR045283 -
Tpr6g0705 342 Coils Coil 301 321 - -
Tpr6g0705 342 PANTHER OS12G0156500 PROTEIN 11 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0705 Tpr-Chr6 5837490 5839479 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0705 - - vra:106757292 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0705 6 5837490 5839479 Tpr6g0705 6 5837490 5839479 ECH
Tpr1g2263 1 25398241 25400419 Tpr6g0705 6 5837490 5839479 PCT