Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0675 ATGTCGGTAAAAGAGTGTAACCACCACAAAGGAAAAAAACACAAACGTTTAAGAAAAATCTTCTGGGGAATCATAATCTTCCTCTTCATCGTCCTTGTCACAATTCTAATCATCTGGGCTATCTTAAAACCTTCAAAACCATCTTTCATTCTTCAAGATGTAACAGTTTACGCTTTCAACGCCACAGTTCCAAATTTCCTCACCTCAAATTTCCAAGTCACAGTTTCTTCTCGCAACCCAAACGACAAAATCGGCGTTTACTACGATCGTCTTGATACTTACGTAACTTACCGGAGCCAGCAAGTTACTTACAGAACCGCCATACCACCGTCGTATCAAGGACATAAAGAAGTTGACGTTTGGTCGCCGTTTGTTTACGGAACTAACGTTCCGGTGGCACCATATAACTTTGTTGGTTTAAGTCAAGATCAAACTAACGGTAACGTTCTTGTTGTCGTTAAACTTGACGGTAGAGTTAGATGGAAAGTTGGTGCTTTCATTTCTGGTCATTACCATATTTTTGTTCGTTGTCCTGCTTTTATTACGTTTGGTTCAAGGAGTAACGGAATTAGCGTCGGAGATAGCGGCGCTGTTAAGTATCAGTTAGTTCAACGGTGTACCGTTAATGTTTGA 633 0.4044 MSVKECNHHKGKKHKRLRKIFWGIIIFLFIVLVTILIIWAILKPSKPSFILQDVTVYAFNATVPNFLTSNFQVTVSSRNPNDKIGVYYDRLDTYVTYRSQQVTYRTAIPPSYQGHKEVDVWSPFVYGTNVPVAPYNFVGLSQDQTNGNVLVVVKLDGRVRWKVGAFISGHYHIFVRCPAFITFGSRSNGISVGDSGAVKYQLVQRCTVNV* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0675 210 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
Tpr6g0675 210 PANTHER OS05G0367900 PROTEIN 4 210 IPR044839 GO:0098542
Tpr6g0675 210 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0675 Tpr-Chr6 5596191 5597455 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0675 - - gmx:100795832 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0675 6 5596191 5597455 Tpr6g0675 6 5596191 5597455 ECH
Tpr6g0675 6 5596191 5597455 Tpr1g4391 1 51318477 51319673 PCT