Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4391 ATGTCGGTAAAAGAGTGTGACCATCACAAAGGAAGAAAAAGAATAATCTTCCGAAAAATATTTTGGGGAATCATAGTATTCCTCTTCATAATTCTTCTAACAATTCTCCTCATATGGGCAATCCTAAGACCAACAAAACCAACCTTTGTCCTCTTAGACATAACCGTAGCGGCTTTCAACGCCACGCAACCAAATTTTTTAACATCCAACTTCCAGGTAACCCTATCATCCAGAAACCCGAACGACCACATCGGAGTCTACTACGATCGTCTGGATACTTACATCACTTACCGGAGCCAACAAATTACTTACCGGACAGCTATCCCGCCTTCTTACCAAGGACACAAGGAAATCGACGTTTGGTCGCCGTTTGTTTATGGTACTGATGTTCCGGTTGCTCCTTTCAACTTTGTGAGCCTTTCACAAGATCAATCTAACGGTAATTTTTTTGTTAACGTTAAAATTGACGGTAGAGTTCGTTGGAAGGTTGGTGCGTTTATTTCGGGTCGTTATCATTTACATGCTCGTTGTCCTGCTTATATCTCAATTGGTAATAATGGTAACGGTGTTAATATGGGAGAAAACGCCGTTAAGTATCAGTTGGATCAACGTTGTTCTGTTAGCGTTTGA 630 0.4095 MSVKECDHHKGRKRIIFRKIFWGIIVFLFIILLTILLIWAILRPTKPTFVLLDITVAAFNATQPNFLTSNFQVTLSSRNPNDHIGVYYDRLDTYITYRSQQITYRTAIPPSYQGHKEIDVWSPFVYGTDVPVAPFNFVSLSQDQSNGNFFVNVKIDGRVRWKVGAFISGRYHLHARCPAYISIGNNGNGVNMGENAVKYQLDQRCSVSV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4391 209 PANTHER OS05G0367900 PROTEIN 4 209 IPR044839 GO:0098542
Tpr1g4391 209 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 4 209 - -
Tpr1g4391 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4391 Tpr-Chr1 51318477 51319673 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4391 - - gmx:100788592 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0675 6 5596191 5597455 Tpr1g4391 1 51318477 51319673 PCT