Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr6g0649 | ATGGAATCTGAAAATGAAGTTGCTATGGAGGAAGAGAAACGTGTTATTGGAGTGACATCTAAGGAGAATATAAACAAAGAAGATGCAAACATTTGCGGCGAAGAAATTCAAAATGAGAATGTAGATTCTAAGGTTGAAAGCCACATATCTATTGGTGACATTGTTGAAGTTGAAGCCTCTAAAAATTCAAAACTTCCTAAGGAAACAAAGAGCAGAGAAAGTGTTGCTTCCAAGAGCAACAAATTTGTCAAAGATAAATCCAATTTGAAAGGTACAACTTCAATATCTAGAAAACAAAGGTCAACACTTTCTCAGAGTTTGTCTTTCCCATCCAAATCAACTAGAGAAGATTCTATGCATAAAAGCATGGATGGGAGTCTTGTGAAGACAAAAGCTAAACATGTTCAAGCCTCGACTCTCCGTCATTCAAGCAAGTCCACAAACTTTGAAGGGAAATCAAATGAGGGAAAAACAAACATTGAAGGTTGTAAAAAGAGGACTACTTTGATATCAATGCCTGGTTTGAAACGCTCTGTGTTTGGAAGGTCTACTTCAGTTGCTGCAGTCACCAAAAGCCACACATCTGAGGCAGCTCTACCTGCTGATCAAATATCAAACTCATCAAAAACTGCAAAACCAAGTAAAGAGGATGACGATTCTCACTCCACAACTTCAAGCGCTGCTCTTCGTCAGAGAAACATATGTTCTGGATTTTCATCAAGATTGGAAGAAAGAGCTGAAAAGAGGAAGGAGTTTTTCTCAAAGATAGAGGAAAAAGTTCTAGCCAAGGAAGCAGAAAAAACCAACCAACAAGCCAAATCAAAGGAAAACCAAGAGGCAGAGATCAAGCAATTGAGGAAGAGCTTGACTTTCAAAGCCACTCCAATGCCAAGTTTCTATAGGGAACCACCTCCAAAAGTTGAGCTCAAGAAGATACCAACAACCCGGCCAAGATCTCCAAAGCTTGGAAGACACAAAGAGTCTTGCACAAGTCCACGTGGGAATCAACAGCAGAATGACTCAACCAAGGTAAAGAACATAATAAAGGGTCATACTAAAGAGGTGATTTCAAAGAAACCAATGAGAAAAACCCAAGCCAAGGTGAAGTGTCAGGAAAATGCAACCAAAGGAAGCAATGAAGAATGCCAAAGTCCACATGTAAACAATTCTGAATTCAAAGATGACATTGAGCAACAATCTGAGACAGATCATGCTGCAAATGATTATGCACAGGCTTTAGATTCTACTACTACACTTGAGTTTCCATCATGTGAGGTTACTGTTGGAGTGTAG | 1293 | 0.3929 | MESENEVAMEEEKRVIGVTSKENINKEDANICGEEIQNENVDSKVESHISIGDIVEVEASKNSKLPKETKSRESVASKSNKFVKDKSNLKGTTSISRKQRSTLSQSLSFPSKSTREDSMHKSMDGSLVKTKAKHVQASTLRHSSKSTNFEGKSNEGKTNIEGCKKRTTLISMPGLKRSVFGRSTSVAAVTKSHTSEAALPADQISNSSKTAKPSKEDDDSHSTTSSAALRQRNICSGFSSRLEERAEKRKEFFSKIEEKVLAKEAEKTNQQAKSKENQEAEIKQLRKSLTFKATPMPSFYREPPPKVELKKIPTTRPRSPKLGRHKESCTSPRGNQQQNDSTKVKNIIKGHTKEVISKKPMRKTQAKVKCQENATKGSNEECQSPHVNNSEFKDDIEQQSETDHAANDYAQALDSTTTLEFPSCEVTVGV* | 431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr6g0649 | 430 | Coils | Coil | 258 | 288 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 329 | 345 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 86 | 113 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 387 | 402 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 185 | 240 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 368 | 386 | - | - | |
| Tpr6g0649 | 430 | PANTHER | PROTEIN WVD2-LIKE 4 | 1 | 375 | IPR044833 | GO:0008017 | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 264 | 286 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 185 | 210 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 224 | 238 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 58 | 165 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 304 | 328 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 137 | 155 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 114 | 128 | - | - | |
| Tpr6g0649 | 430 | PANTHER | TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN | 1 | 375 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 60 | 85 | - | - | |
| Tpr6g0649 | 430 | Pfam | Targeting protein for Xklp2 (TPX2) domain | 241 | 307 | IPR027329 | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 346 | 361 | - | - | |
| Tpr6g0649 | 430 | MobiDBLite | consensus disorder prediction | 264 | 403 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr6g0649 | Tpr-Chr6 | 5270958 | 5274529 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr6g0649 | - | - | mtr:MTR_7g106750 | 617.461 |
Event-related genes