Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0636 ATGGATTTGGAATCTTTCGACGATTCTTTGAATACCAAAACATGCAAATGTCGCGACTGCAATTGCGAATGCTGCTGCTCCGAAGGGAGAACGGATTGGATCCGTTCTGTGAAACGGAAACACGATGAGTCGGAAAAGGCGAAAAAGTTGAACAACAGCGGTGGTGATGGCGTTGTTCGTGTTGAAATTGGGGACGAATGTGTTGCCTTACGACAGGCGGTTAGCGGTCAGCAAAAAGCAATTCAGGATTTGTATTCTGAATTGGAGGAGGAGAGGAATGCTGCTTCGTCTGCAGCGAATGAAACAATGTCGATGATATTGAGGTTGCAGACTGAGAAAGCTGAACTTGAAATGGAAGCGCGGCAATTCAAGCGATTTGTTGAGGAGAGGACTAGTCATGATCAGCAGGAGATTTTAGCTTTGGAGGAATTGTTGTATAAAAGGGAACAGACGATTCATTCGCTTACGTGCGAAATTCAGGCTTATAAACATAGATTGATGAGTTATGGTTTAACTGAGTCAGACGTGGAAGGTGATTATGATTTTCCACCTTATGAGTATCCTCCTTTGAAATGTAATGTAATGCATGCTGTCACGGACGCTGAGAATGATGATGTTCTTGATGTTGATGTTGAGAAGTATGCGTTTGGGGAAACTCCTAGGGATCGTTTGAGGAGTTTGGAGAATAGGATATCTCAAATGGAGAGAACTCCAACTTATAGTCAGATGGAAGGTGATTTCGGCACAAAGAATATTATAGAGAAGGTAATAGTCGGACAATCTCCTAAAACAAATATACATTCAAGGAAATTTTCATGTGACTCGTCCTCGTTTGGCCCCGAGTTTGTGTCGGATTCTCCCAGATTCAATGGCTGCATTAAGAAGATGAATAATGGGTCAGAGGATTTCTCCAATTTTAAGAAGATGGATAATGTGTCCGAGGCTGGTGATAATATGACTGATAGAGTTTACACTGTTGACTCTGAATTCAAAGGTGGTGTTGGTGGTTACGATGAGCATTTAACAACTCCAAGGGAGTTTGGAAATCAGGGCGATTTTGAAGATCCATATGTAAAGAAGCTTTACATACGGCTTCAAGCACTTGAGGCGGATAGGGAATCAATGAGGCAGGCAATCATTTCGATGCGTACTGATAAAGCACAGCTTGTTTTGCTCAAGGAAATAGCTCAACACTTGTGCAAAGAGATGTCAGATCAGAGGAAAGTTACCGTGAAAACCTTTGTTGGCGGCATCTCATTCTTCACAATCTTTAAGTGGGTTGCTTCAATTCTTTTCTGGAGAAAGAGAAGTCATCAAATCAAGTATATGTTTGGGCAACCATCTAGCAGTTCTGGCATGCTAATGCTCCTCGACAAAGGACCCAATGTAAGGTCGTGGAGATATGTTTCAAGAGTACAATTGGGAGAATAG 1431 0.4214 MDLESFDDSLNTKTCKCRDCNCECCCSEGRTDWIRSVKRKHDESEKAKKLNNSGGDGVVRVEIGDECVALRQAVSGQQKAIQDLYSELEEERNAASSAANETMSMILRLQTEKAELEMEARQFKRFVEERTSHDQQEILALEELLYKREQTIHSLTCEIQAYKHRLMSYGLTESDVEGDYDFPPYEYPPLKCNVMHAVTDAENDDVLDVDVEKYAFGETPRDRLRSLENRISQMERTPTYSQMEGDFGTKNIIEKVIVGQSPKTNIHSRKFSCDSSSFGPEFVSDSPRFNGCIKKMNNGSEDFSNFKKMDNVSEAGDNMTDRVYTVDSEFKGGVGGYDEHLTTPREFGNQGDFEDPYVKKLYIRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQHLCKEMSDQRKVTVKTFVGGISFFTIFKWVASILFWRKRSHQIKYMFGQPSSSSGMLMLLDKGPNVRSWRYVSRVQLGE* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0636 476 Coils Coil 358 385 - -
Tpr6g0636 476 Pfam Zein-binding 69 159 IPR007656 -
Tpr6g0636 476 PANTHER BNAANNG28530D PROTEIN 1 451 - -
Tpr6g0636 476 Coils Coil 74 119 - -
Tpr6g0636 476 ProSiteProfiles GTD-binding domain profile. 65 163 IPR007656 -
Tpr6g0636 476 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0636 Tpr-Chr6 5198938 5202200 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0636 - - gmx:100802555 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0636 6 5198938 5202200 Tpr6g0636 6 5198938 5202200 ECH
Tpr6g0636 6 5198938 5202200 Tpr1g4454 1 52356635 52360854 PCT