Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0608 ATGGCTAACTTTTTCAGGGTTCTTGAAGAGTTTGCGCGAGTGGATGATCGACAATCTAGGATTGATATGTTTGAGAAATTCTCATGGAAGATTGAGAACTTTTCTCGATTGACCGATAGTGATCAGTATTACTCTGAGCCTTTCGTCCTCTGTGGCCATCCATGGAGGATTCTTGTTTATCCATATGGGAACGACACAGACTGCGTGTCAATTTATTTGGATTATATGCAATCTCCTAATTCTCATCAGCGCGAGATCAGAGATGTGACATTCAGTCTGTTTGTATTTAATCAGTTCGATAGCTGCATGACAATCACAAAAGAGACTGATCATGTGTTCAGTGAAAGGGAGAAGTCCTGGGGTTTCACACATTTCATTCCTTTAGCTGAGATCCATAATCCTGGCTTGGGGTTTCTTGTGAACGATGTTATTATTATTGGCACGGAGGTTTATGTTCACAATTCATGGCGCGAGAATCATGTGAATCCAACTGCCAACTTCACATCCGGAAGTCATAGCAGTAGTGGACATATGGAAGTTCCAAGGCCAATGCCATTGCCAATGCCACAAGCCCATGTCCCAAATTTGGAATCTCTTTCTGAATTCCCAACATTAGTTCATACTGAGCCTACTAGAGACACTACTGATGTGGAATTATTCTCGGACTCGGTTGGTGAGCTTATGGATTTCGCGGGTTTAGGCAAAGTGGAAAAATCTTTTGTTCCATTACTAAATGAAGTATGTTCTCATCATCCTTCACTTATTGAGTGTCAGCAGAGGAGAAGTCGCAAGTTTACCGAGTGGGCTTTCACTGCTTTGGGAAGAGTTCTCTATTTTCTTAAGACAAGAAAGGTGAAAGACATGAATGAGCAAGCTTGTAAGGATCTTCAAATGTTATGGGAGGAACTCGAGACATTCAAATTTGATCTGACTTGGCTAGAGCCTCATGTTCAATCTGCATTAGGAATGAAAAATTATGTGGAGAAAGCTGTGCAAATGGAAGAGCTGAAGAAGTATGTGGAAAGTCTAACTTTGGAAATGGAAAGTTTTAAAACAAAATTGGCAACTGTTGAGGTACATCTTGACATAGCAAAAGACTTGCTGAAAGAAGAAAGCCTCAATGAGAGACATTTGAATGCTGAACTAGGATATGGGATGCCATAG 1164 0.4081 MANFFRVLEEFARVDDRQSRIDMFEKFSWKIENFSRLTDSDQYYSEPFVLCGHPWRILVYPYGNDTDCVSIYLDYMQSPNSHQREIRDVTFSLFVFNQFDSCMTITKETDHVFSEREKSWGFTHFIPLAEIHNPGLGFLVNDVIIIGTEVYVHNSWRENHVNPTANFTSGSHSSSGHMEVPRPMPLPMPQAHVPNLESLSEFPTLVHTEPTRDTTDVELFSDSVGELMDFAGLGKVEKSFVPLLNEVCSHHPSLIECQQRRSRKFTEWAFTALGRVLYFLKTRKVKDMNEQACKDLQMLWEELETFKFDLTWLEPHVQSALGMKNYVEKAVQMEELKKYVESLTLEMESFKTKLATVEVHLDIAKDLLKEESLNERHLNAELGYGMP* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0608 387 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 24 363 - -
Tpr6g0608 387 Coils Coil 333 353 - -
Tpr6g0608 387 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 24 363 - -
Tpr6g0608 387 CDD MATH 26 150 IPR002083 GO:0005515
Tpr6g0608 387 ProSiteProfiles MATH/TRAF domain profile. 24 150 IPR002083 GO:0005515
Tpr6g0608 387 SUPERFAMILY TRAF domain-like 26 156 - -
Tpr6g0608 387 SMART math_3 26 131 IPR002083 GO:0005515
Tpr6g0608 387 Pfam MATH domain 31 150 IPR002083 GO:0005515
Tpr6g0608 387 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 23 167 IPR008974 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0608 Tpr-Chr6 4984768 4986949 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0608 - - mtr:MTR_7g107200 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4461 1 52503996 52506214 Tpr6g0608 6 4984768 4986949 PCT