Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0596 ATGATGAATAAATTCAAAAATGGTTTTCTTCCATTGATGAACCTTCAATTTCAACATCGTGGCATAGCAAAAGTACGTTTAAAATGGGTAAAAAATCGAAGCCTCGATCACATAATCGACAAAGAAACCGATCTAAAAGCTGCATCACTTCTCAAAGACGCAATCAAACGTTCCTCCACCGGTTTCCTCACCGCCAAAACTTTCTCCGATTGGCAAAAGCTTCTCGGATTAACCGTTCCCGTTCTCCGATTCATGCGCAGGTATCCAACTCTCTTTCACGAATTTCCTCATCCTCGTTGGAATTCTCTTCCTTGTTTCCGATTAACCGAAACCGCGGAACTGTTAGATTCACAGGAACAAAGCATTTACACTCTTCACGAAAACGACACCGTTGAGAGACTCTCTAGGTTAATTATGATGACGAAAAATCGTACTGTTCCGTTACAGTCTCTTTATCCTCTTAAATTTGATTTAGGTTTTCCTGATTCGTTTGAGAAAACATTAATTCCTAAATATCCTGAGAAATTTCAATTTGTTAAGGCTTATAATGGTGTTACCGCGATTCGTCTTAAGGATTGGTGTGATGAATTTGCGGTTTCGGCTTTGCAGAAGAGTAATGAGTGTGAGTGTGAGAGTGGGAGTGATCAGTATAGAGAGTTTAAGAGAGGGAAAACTGCGTTGGTTTTTCCGATGAGGTTTCCGAGAGGTTATGGTGGTCAGAAGAAGGTTAGGTTTTGGATGGATGAGTTTCAGAAATTGCCTTATATTTCGCCTTATGCTGATTCTTCTAAGATTGATCCGAAAAGTGATTTGATGGAGAAGCGCGTCGTTGGGGTTTTGCATGAGATTTTGAGTTTGTGTTTGCATAAGAAAACTAAGAGGAATTACTTGAGAAGTTTGAGGGAGGAGTTGAATCTTCCTCATAAGTTTACTAGGATTTTTACTAGATATCCTGGGATATTTTATCTTTCGTTGAAGTGTAAAACGACTACTGTTACTCTTAGAGAAGGTTATGCGAGGGGGAAATTGATTGACCCGCATCCACTTGCTCGTCATAGAGATAAGTTTTATCATGTGATGAGGACAGGGCTTCTTTATCGTAGTGATGGATCATTGAAACTTGGGGAAGATGCTTTGATGGTTGATTCTGTGGAGAATGATGAAATGCGGGATGGGGATTCTGAGGAGGAAGAAGTTGAAACAAGTGATGAATTCTCCGAGGATGAAGTTTCAGACTCGGATGATAGTGAATGA 1254 0.4003 MMNKFKNGFLPLMNLQFQHRGIAKVRLKWVKNRSLDHIIDKETDLKAASLLKDAIKRSSTGFLTAKTFSDWQKLLGLTVPVLRFMRRYPTLFHEFPHPRWNSLPCFRLTETAELLDSQEQSIYTLHENDTVERLSRLIMMTKNRTVPLQSLYPLKFDLGFPDSFEKTLIPKYPEKFQFVKAYNGVTAIRLKDWCDEFAVSALQKSNECECESGSDQYREFKRGKTALVFPMRFPRGYGGQKKVRFWMDEFQKLPYISPYADSSKIDPKSDLMEKRVVGVLHEILSLCLHKKTKRNYLRSLREELNLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREGYARGKLIDPHPLARHRDKFYHVMRTGLLYRSDGSLKLGEDALMVDSVENDEMRDGDSEEEEVETSDEFSEDEVSDSDDSE* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0596 417 Pfam Plant organelle RNA recognition domain 30 363 IPR021099 GO:0003723
Tpr6g0596 417 MobiDBLite consensus disorder prediction 383 417 - -
Tpr6g0596 417 MobiDBLite consensus disorder prediction 388 417 - -
Tpr6g0596 417 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 16 414 IPR045040 GO:0003723
Tpr6g0596 417 PANTHER OS04G0546100 PROTEIN 16 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0596 Tpr-Chr6 4875894 4878764 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0596 - - gmx:100808403 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0596 6 4875894 4878764 Tpr1g1994 1 20446833 20450027 PCT