Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0594 ATGCTGAACGTGCTACGTGTGCACCTTCCTTCTGATATTCCCATTGTTGGGTGTGAGCTTACGCCTTATGTGCTCTTACGACGAACTGATAAGACCGTTACAACCGACGATGTTACCGAAATCTCTCCCTTAGATGGGCATTTCTTGCGTTATAAGTGGTATCGTGTACAGAGTGATAAAAAGGTTGCTGTTTGTAGTGTGCATCCATCCGAGCAGGCCACACTGCAGTGCCTAGGTTGTCTCAAGGCTAAAATACCAGTTTCCAAAAGCTATCATTGCACTCCAAAGTGTTTCTCAGATGCATGGCAGCATCACCGAGTCTTACATGACCGTGCTGCAAGTGCAGTAAATGAAAATGGAAACGAGGAGGAGGAGGTATTTGGGAGATTTAATAATTCTGGGTCTGGGTCAATCAATACCACCTTATCCTCCTCTGCATCTAGTACTAGCCTGACAAACGGAAATGTGTATCCTGCAACTGTTTCACAACGAAATGGCGGTGAAACTTGGTTTGAAGTTGGACGATCAAAGACATATACCCCATCAGCTGATGACATTGGTCATGTCCTTAAATTTGAGTGTGTTGTAGTTGATGCAGAGACAAAGCTTACTGTGGGGCACACAAACACTATACTAACTTCCCGGGTCATTCCTGCTCCCTCACCTATCCCGCGCCAACTAATACCTGTTGACACAATGGGTAGTTTGGATGATAGGCGTATAACATCGTCGGGAACTTTTACTGTTTTATCATACAACATATTGTCTGATTCATATGCCTCAAATGATCTATACAATTACTGCCCTTCGTGGGCTCTTTCCTGGCCGTATCGCAGACAAAATTTGCTACGAGAAATAGTTGGTTACCGTGCCGATATTATTTGTCTCCAGGAGGTTCAAAGTGATCATTACGATGAATTTTTCGCTCCTGAACTGGACAAACATGGATATTATGGTCTTTACAAGAGAAAAACAAATGAGGTATATAATGGCAACATAAATACAATTGATGGTTGTGCAACATTTTTCCGTAGAGACAGATTCTCGCATGTGAAGAAATATGAGGTTGAGTTTAATAAGGCCGCACAGTCCTTAACAGATGCCATGATTCCAACCACTCAGAAGAAAAATGCCTTGAATCGGCTAGTTAAGGATAATGTCGCACTAATAGTTGTTTTAGAAGCAAAAGTTAACAATCAGCCTATTGATAATCCAGGGAAAAGACAGCTTCTGTGTGTGGCAAATACACATGTAAATGTCCACCAAGATTTAAAGGATGTCAAGCTCTGGCAGGTGCACACTCTCTTAAAAGGATTGGAGAAAATTGCTGTCAGTGCAGACATTCCCATGCTGGTTTGTGGAGACTTCAATTCAGTTCCGGGAAGTGCTCCTCACGCACTTCTTGCAATGGGAAAGGTAGACCCATCTCACCCCGATTTAGCAGTTGACCCACTCAACATATTGCGTCCTCACAGCAAGTTGATTCACCAGTTGCCACTGGTCAGTGCGTATTCTTCTTTTGCAAGAACGGTTGGTCTTGGATATGAGCAGCATAAGCGGAGAATGGACAGCTCAACAAATGAACCTTTATTTACAAATGTCACTAGAGATTTTATTGGCTCTCTTGATTATATATTTTACACAGCGGATTCATTGGTCGTGGAGTCATTACTGGAGCTATTGGATGAGGAGAGTTTGCGGAAAGACACAGCTCTACCTTCTCCTGAATGGTCCTCAGATCATATAGCACTCTTAGCTGAGTTTCGCTGTTGCAAAAATATATCCAGGCGATGA 1794 0.4287 MLNVLRVHLPSDIPIVGCELTPYVLLRRTDKTVTTDDVTEISPLDGHFLRYKWYRVQSDKKVAVCSVHPSEQATLQCLGCLKAKIPVSKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEEVFGRFNNSGSGSINTTLSSSASSTSLTNGNVYPATVSQRNGGETWFEVGRSKTYTPSADDIGHVLKFECVVVDAETKLTVGHTNTILTSRVIPAPSPIPRQLIPVDTMGSLDDRRITSSGTFTVLSYNILSDSYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYDEFFAPELDKHGYYGLYKRKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTTQKKNALNRLVKDNVALIVVLEAKVNNQPIDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLIHQLPLVSAYSSFARTVGLGYEQHKRRMDSSTNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNISRR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0594 597 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 592 - -
Tpr6g0594 597 Gene3D Endonuclease/exonuclease/phosphatase 216 596 IPR036691 -
Tpr6g0594 597 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 592 - -
Tpr6g0594 597 CDD Deadenylase_CCR4 249 590 - -
Tpr6g0594 597 Pfam Endonuclease/Exonuclease/phosphatase family 250 581 IPR005135 GO:0003824
Tpr6g0594 597 SUPERFAMILY DNase I-like 242 591 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0594 Tpr-Chr6 4862254 4868202 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0594 K12603 - gmx:100775270 1049.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0594 6 4862254 4868202 Tpr1g4492 1 52935837 52942199 PCT