Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0586 ATGAGAGGACCAGTGATGGTAACAAAGAGTGGTGGATGTGGTGGTGGTAGTGGTTTCAAAGGAAAAAGAGGAAACAACGGCGGCAGCGAAGAAGTGTCGCCGGCGGCTTTAATGTTGGCTGCTTTGAAGAAATCAATGGTGGCTTGTAGTGTGGAGAGTCCTGACGATGTAATCTCAGCCGTTCATCATCCTATGGAGATTGGTTGGCCTACAAACGTTAAACATGTTAGTCATGTTACGTTTGATAGGTTTAATGGGTTTTTGGGTCTTCCTCTTGAGTTAGAGGTTCATGTTCCTGTTCCTGTTCCCAGTGCTAGTGTTAGTGTGTTTGGTGTCTCAGCAGAATCAATGCAATGTTCTTATGATTCAAAAGGAAACAGTGTCCCAACTATTCTGCTACTAATGCAAGAGAGATTATACTCACAAGGAGGACTAAAGGCTGAAGGAATATTTCGTATAAATCCCGAAAACGGTGAAGAGGAACATTTAAGGGAGCAATTGAATAGTGGCATAGTGCCAAATGACATTGATGTTCATTGTTTGGCTGGTTTAATAAAAGCATGGTTTAGGGAACTTCCTTCTGGAGTATTGGATGGACTTTCACCTGAGCAAGTTCTTGAATGCAACACAGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTGAATCCAGTTGAATCAGCTTTGCTTAATTGGGCTATTGAACTTATGGCTGATGTTGTAGTTGAAGAGGAGTATAATAAAATGGATGCTAGAAATATTGCAATGGTTTTTGCTCCAAATATGACTCAGATGTCTGATCCGCTAACTGCTCTAATGCACGCGGTCCAAGTGATGAATTTACTAAAGACACTGATATTGAAGACACTTCGAGATCGCGAAGAATCAGCAACATCAGAATATTCATCCATGTCATCTCATTCATCAGAAGATGATGACTATGATAGTCAACAAGAAATGGATACCAGTGGTGAAATGAAAAGGGCCAAGTTAGATTATGATGATCATGTTGATTACAATCACAACATTGAAGAAGTTGCATCTGTAAGTGAAATAGAGGAATGTCTGGATGATGTTAAGACAAAACGATTCGCAGAAGAGTTAGAGAGTCCTACTAAAACTGAGGATTCCTGTCTGAGTTCTAGTTATAGAGACGGCTCGACGACAACTCTAACTGCTGAGGGATCAAATGCTGACACAACAAGTAGTCCATCAATAGAAAGTAAAGAAACCAATGATGTGGAGATGGTAGATAAATTTACTGATTCTGTTTCACTTTTGCCTTTGTTTGCATCTAGTTAA 1299 0.4018 MRGPVMVTKSGGCGGGSGFKGKRGNNGGSEEVSPAALMLAALKKSMVACSVESPDDVISAVHHPMEIGWPTNVKHVSHVTFDRFNGFLGLPLELEVHVPVPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEGIFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESVELVKQLNPVESALLNWAIELMADVVVEEEYNKMDARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLILKTLRDREESATSEYSSMSSHSSEDDDYDSQQEMDTSGEMKRAKLDYDDHVDYNHNIEEVASVSEIEECLDDVKTKRFAEELESPTKTEDSCLSSSYRDGSTTTLTAEGSNADTTSSPSIESKETNDVEMVDKFTDSVSLLPLFASS* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0586 432 PANTHER MKIAA1688 PROTEIN 1 432 IPR044785 GO:0005096
Tpr6g0586 432 Pfam P21-Rho-binding domain 66 94 IPR000095 -
Tpr6g0586 432 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 432 - -
Tpr6g0586 432 MobiDBLite consensus disorder prediction 296 323 - -
Tpr6g0586 432 Pfam RhoGAP domain 129 263 IPR000198 GO:0007165
Tpr6g0586 432 Gene3D CRIB domain 62 98 IPR036936 -
Tpr6g0586 432 ProSiteProfiles CRIB domain profile. 67 80 IPR000095 -
Tpr6g0586 432 CDD RhoGAP 129 279 - -
Tpr6g0586 432 ProSiteProfiles Rho GTPase-activating proteins domain profile. 112 293 IPR000198 GO:0007165
Tpr6g0586 432 MobiDBLite consensus disorder prediction 373 409 - -
Tpr6g0586 432 SMART RhoGAP_3 126 289 IPR000198 GO:0007165
Tpr6g0586 432 MobiDBLite consensus disorder prediction 366 411 - -
Tpr6g0586 432 CDD CRIB 65 95 - -
Tpr6g0586 432 Gene3D Rho GTPase activation protein 99 291 IPR008936 GO:0007165
Tpr6g0586 432 SMART PBD_5 67 101 IPR000095 -
Tpr6g0586 432 SUPERFAMILY GTPase activation domain, GAP 108 286 IPR008936 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0586 Tpr-Chr6 4803759 4807027 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0586 - K20642 gmx:100812700 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0586 6 4803759 4807027 Tpr1g1260 1 11305949 11309378 PCT