Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0571 ATGGAGAAAGTGATGAGGTTGGCATCTGAAAAGGGTGTGGTGATATTCACAAAAAGTTCATGTTGTCTATGTTATGCAGTTAACATTTTGTTTCAAGAACTTGGGATTAGGCCTATGGTTCATGAAATTGATCAAGATCCTGAAGGAAGGGATATGGAGAAAGCTTTGTTGAGGTTAGGTTGTACTGCACCTGTTCCAGCTGTGTTCATTGGAGGGAAACTTATGGGATCTACCAATGAAATTATGTCACTTCATCTAAGTGGTTCACTCACTCAATTGCTCAAACCATATCAATCTCGTTCTTGA 306 0.3922 MEKVMRLASEKGVVIFTKSSCCLCYAVNILFQELGIRPMVHEIDQDPEGRDMEKALLRLGCTAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQLLKPYQSRS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0571 101 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Tpr6g0571 101 CDD GRX_GRXh_1_2_like 13 93 - -
Tpr6g0571 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 98 IPR011905 -
Tpr6g0571 101 Gene3D Glutaredoxin 1 99 - -
Tpr6g0571 101 Pfam Glutaredoxin 13 74 IPR002109 -
Tpr6g0571 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 98 - -
Tpr6g0571 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Tpr6g0571 101 PANTHER GLUTAREDOXIN 1 98 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0571 Tpr-Chr6 4612890 4613715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0571 1 95 Miscellaneous Gene Families AT4G15670 48.421 8.60e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0571 K03676 - gmx:100499748 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0571 6 4612890 4613715 Tpr1g1271 1 11415771 11416458 PCT