Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1271 ATGGAGAAGGTGATGAGGTTGGCTACAGAAAAAGGTGTAGTGATTTTCACAAAGAGTTCATGTTGTCTATGTTATGCAGTGAATGTTTTGTTTCAAGAAGTTGGAGTGTACCCTGTGGTTCATGAAATTGACAAAGATCCTGATTGTAAAGAAATGGAGAAAGCTATAAAAAGGTTAGGTTGTAATGCACCTGTCCCTGCAGTATTCATTGGAGGAAGACTTGTAGGGTCTACTAATGAAGTAATGTCCCTCCACTTAAGTGGTTCACTCATTCCACTATTGAGGCCATATAGAATGTAA 300 0.3867 MEKVMRLATEKGVVIFTKSSCCLCYAVNVLFQEVGVYPVVHEIDKDPDCKEMEKAIKRLGCNAPVPAVFIGGRLVGSTNEVMSLHLSGSLIPLLRPYRM* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1271 99 CDD GRX_GRXh_1_2_like 13 93 - -
Tpr1g1271 99 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 99 - -
Tpr1g1271 99 Gene3D Glutaredoxin 1 98 - -
Tpr1g1271 99 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Tpr1g1271 99 PANTHER GLUTAREDOXIN 1 99 IPR011905 -
Tpr1g1271 99 Pfam Glutaredoxin 13 75 IPR002109 -
Tpr1g1271 99 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 96 IPR011905 -
Tpr1g1271 99 ProSiteProfiles Glutaredoxin domain profile. 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1271 Tpr-Chr1 11415771 11416458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g1271 1 95 Miscellaneous Gene Families AT4G15670 50.526 7.08e-34 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1271 K03676 - gmx:100500442 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1271 1 11415771 11416458 Tpr1g1271 1 11415771 11416458 ECH
Tpr6g0571 6 4612890 4613715 Tpr1g1271 1 11415771 11416458 PCT
Tpr1g1271 1 11415771 11416458 Tpr6g0570 6 4609640 4610697 PCT