Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0517 ATGGCTCGTTCTTTCGCTAACGCTAAGGTTTTTTCCGCTATTGTTCTTGAAGGATTCTCTAACACTTTCACAAGACGTGGTTACGCTGCTGCAACAGAAAGTGCAACAAGGGGAGGAGCAGTGTCTATTGGTAACAAGATGGGACCCACAAAGACAGGGGAAGAGGTTGTTTCTACTTATAAGGTTTCTTGGGTACCGGATCCTATTACCGGTTACTATAAGCCTGAAAATGTTAAGGATGTTGACGCTGCTGAATTACGTGCTAAACTTCTCCGCAAGAAACTTAACAACTAA 294 0.432 MARSFANAKVFSAIVLEGFSNTFTRRGYAAATESATRGGAVSIGNKMGPTKTGEEVVSTYKVSWVPDPITGYYKPENVKDVDAAELRAKLLRKKLNN* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0517 97 Pfam Late embryogenesis abundant protein 1 91 IPR004926 -
Tpr6g0517 97 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 95 IPR004926 -
Tpr6g0517 97 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0517 Tpr-Chr6 4227161 4227938 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0517 - - gmx:100527032 119.012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0517 6 4227161 4227938 Tpr1g1311 1 11811674 11812509 PCT