Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1311 ATGGCTCGCAACTTCAATAACATCAAGACTTTCTCTGCTCTTGTTGCTGATGGATTCTCCAACTCTCTTACTAGACGAGGATATGCGGCGGCAGCGACACAAAACACAACAAGAGGAGTGGCAACCTCCGTGAGCGGCAAGATAGTATCATCCAAATCAGGAGAAGACAAGGTGGCAAATGCCGGAAAGGTTACGTGGGTCCCAGACCCCGTGACTGGTTACTACAAACCGGAAAACACCAACGAGGTTGATGTTGCTGACCTAAGAGCCACAGTTTTGGGCAAAAAGTAA 291 0.4845 MARNFNNIKTFSALVADGFSNSLTRRGYAAAATQNTTRGVATSVSGKIVSSKSGEDKVANAGKVTWVPDPVTGYYKPENTNEVDVADLRATVLGKK* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1311 96 Pfam Late embryogenesis abundant protein 1 93 IPR004926 -
Tpr1g1311 96 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 96 IPR004926 -
Tpr1g1311 96 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1311 Tpr-Chr1 11811674 11812509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1311 - - vun:114190398 134.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0517 6 4227161 4227938 Tpr1g1311 1 11811674 11812509 PCT