Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0482 ATGGAGCCACCAAACATTGAAATTCCTAACGTTCCTCAAGATGATGTTAATGTTGAATCAAAACCAAAACCAATTCTCACCCGAAAGAGGAAGAGTGGTCCAATGAATGTTCTTAGGGTGGCAATTCTAATGATGAGAGGAAGTCCTAAAAAATCAAACGTGACTCCTAAGAAATCAAATGTGACTCCTAAAGATGATGAATCAAAGAATGTTTGGAGCAAACTTGTCGGGTCAATTAGACCGTTACATCTTCAAAGTAACCAATCCCCACGATCATGTAACCAATCCCCACGATCATTTAGCGGTCAGAAATTCAACCAATTGATCCCTCTGGCACCGGATTCTCCTTCGTCTGAATGTGGTGCCAGCATGTTTACCGCAGAGGAGGAGCCTTATTCGCCATTGCAAAAGTCACCATCGATTAGCCGTTATGCTTCGGCTGTAGGATTGAACGAGCTCGTGAAAAGTGAGGCGACTAGCCGTTATGCTTCGGCTGTAGGATTGAACGAGCTTGTGCCAAGCGATGAGGAGAATGAGAAAGAGGAAGCGATTGAGGACGAGGTTGGTGAAAATGGGGATGAGAAGATTGATGCTAAAGCTGATGAGTTTATTGCTCAATTCTATCAACAAATGAGGTTGCAACGTTTGAATAATGTGAATCGTCACTACAAAGAGCGAAGTCAAAGGTCATTAGGACTTTAA 702 0.4288 MEPPNIEIPNVPQDDVNVESKPKPILTRKRKSGPMNVLRVAILMMRGSPKKSNVTPKKSNVTPKDDESKNVWSKLVGSIRPLHLQSNQSPRSCNQSPRSFSGQKFNQLIPLAPDSPSSECGASMFTAEEEPYSPLQKSPSISRYASAVGLNELVKSEATSRYASAVGLNELVPSDEENEKEEAIEDEVGENGDEKIDAKADEFIAQFYQQMRLQRLNNVNRHYKERSQRSLGL* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0482 233 Pfam Cotton fibre expressed protein 193 228 IPR008480 -
Tpr6g0482 233 MobiDBLite consensus disorder prediction 44 139 - -
Tpr6g0482 233 PANTHER COTTON FIBER PROTEIN 156 228 - -
Tpr6g0482 233 PANTHER COTTON FIBER PROTEIN 4 157 - -
Tpr6g0482 233 PANTHER COTTON FIBER PROTEIN 156 228 - -
Tpr6g0482 233 PANTHER COTTON FIBER PROTEIN 4 157 - -
Tpr6g0482 233 MobiDBLite consensus disorder prediction 80 113 - -
Tpr6g0482 233 MobiDBLite consensus disorder prediction 1 32 - -
Tpr6g0482 233 MobiDBLite consensus disorder prediction 174 193 - -
Tpr6g0482 233 MobiDBLite consensus disorder prediction 175 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0482 Tpr-Chr6 3985452 3986229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0482 - - mtr:MTR_7g109300 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0482 6 3985452 3986229 Tpr1g2234 1 25111491 25112173 PCT