Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2234 ATGGAGTCAAAGGTTGAGAAAGCCATGATTAGCTTTAATCCAGAATCTAAAACAACCCTTGATCATAATCCTCAACCCAAAAAAACATCAAAAAGATCTAAGAACATTTTTAAGGTTGTATTATTAATGATGCGAGGGCATTCTCGTAAATCAACAAAAGCGGTTTTTCCCGTTGAGGATGAGTCAAAAAGTACATGGAGGAAGATTGTGGGGTCCATGAGACCCATGCATCTTCAAAGCAATCAATCGCCACCGCGAATTATCAACGGTGAGAATAATCTTAAAAATGTGGCCATTGAAGAAAATAATAATGTTGATATTCAAGGTAAGGATGGGTTTGATTATGAACCGGAGTCTTCGTTATCGCCATCTCCGGATAGTAGCCGATATGTTTCGGCGACTAATAGCCTTTACGCTTCAGCGGTAGGGCTAAATGAAATGGTTGAGGAGGAGAAAGAGGAAGAAATTGGTGATGATGGTGATGACATGATTGATGCTAAAGCTGAAGAGTTTATTGCTCAATTTTATCAAGAAATGAGGTTGCAGCTTATGGATGATATTGTGGATCATCGTTACAAAGAGATAAGTATGAGGTCATTAGGATTATAA 609 0.3826 MESKVEKAMISFNPESKTTLDHNPQPKKTSKRSKNIFKVVLLMMRGHSRKSTKAVFPVEDESKSTWRKIVGSMRPMHLQSNQSPPRIINGENNLKNVAIEENNNVDIQGKDGFDYEPESSLSPSPDSSRYVSATNSLYASAVGLNEMVEEEKEEEIGDDGDDMIDAKAEEFIAQFYQEMRLQLMDDIVDHRYKEISMRSLGL* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2234 202 PANTHER COTTON FIBER PROTEIN 1 196 - -
Tpr1g2234 202 Pfam Cotton fibre expressed protein 161 186 IPR008480 -
Tpr1g2234 202 MobiDBLite consensus disorder prediction 1 31 - -
Tpr1g2234 202 PANTHER COTTON FIBER PROTEIN 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2234 Tpr-Chr1 25111491 25112173 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2234 - - mtr:MTR_1g087720 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0482 6 3985452 3986229 Tpr1g2234 1 25111491 25112173 PCT