Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0476 ATGGCGGTCACCACTCACTCTCTAACCGCTACAGAAAAGAAACACTGGTGGCTCACAAACCGTAAGATTGTTGAGAAATACATAAAAGATGCACGAAGCTTAATAGCAACGCAAGAACAGAACGAGGTTGTTTCTGCTTTGAATCTTCTAGATGCGGCTTTAGCTATATCACCGCGTTTGGATCATGCGCTTGAGCTTAAAGCTAGATCGTTACTTTATCTACGAAGATTCAAAGATGTTGCTGATATGTTACAAGATTACATTCCTAGTTTGAGAATGTCGAATGAAGATCCTTCCTCTGTTTCTTCTGGTGAAGGAGTTAAGCTTCTTTCTTCTGATTCATCGATTCCAGATCAGAGTTTTAAGTGCTTCTCTGTTTCTGATCTCAAGAAGAAGGTTATGGCTGGTCTTTGTAAAACTTGTGATAAAGAAGGCCAATGGAGATACTTGGTTTTGGGTGAAGCATGCTGCCACTTGGGATTAATGGAAGATGCAATGGTTCTTCTCCAAACCGGAAAACGAATTGCTAGTGCAGCATTCCGGCGAGAGAGTGTTTGCTGGTCTGACGACAGTTTTCCTCTATTAACCATCCCCATTGCTGGAGACACCCCAAACCAACAACCAACCACACCGCCGCGAGCCCCACTCAATGAAACGGAAAGTGTAACACACCTCCTCAGCCACATCAAGTTCCTCCTCCGCCGTCGAGCAGCAGCACTTGCTGCTCTCGACGCTGGTCTCTACTCAGAAGCCATCCGCCATTTCTCAAAAATAGTAGATGGCCGCCGTGCTGCCCCACAAGGTTTCCTCGCAGAATGCTACATGCACAGAGCATCTGCACACCGTTCTGCCGGTCGAATAGCAGAGTCCATTGCTGATTGTAACCGCACCCTTTCACTAGACCCAACCTGTATTCAAGCCCTCGAAACTAGAGCTTCACTCTTCGAAACAATTCGTTGCTTACCAGATTCACTACACGATTTAGAACATCTAAAGCTTCTCTACAACTCCATCTTACGTGATCGGAAACTTCCAGGTCCAGCATGGAAACGCCACAATGTGAGATACAGGGAGATTCCTGGGAAACTTTGTGCCTTAACCACTAAGATTCAAGAATTAAAACAAAGGTTATCTTCTGGTGGAATAACTAGTGTCGATTACTATGCATTGATTGGAGTTCGACGTGGGTGTTCCCGTTCTGAACTCGAGAGAGCACATTTGCTGCTATGTCTTCGCCATAAGCCAGATAAAGCTACAAATTTCATCGAACGGTGTGAGTTTGCGGATGAACGTGATATTGAGACCGTTAAAGAGAAAGCTAAGATGTGTTCATTGTTGTTGTATAGATTGATTCAAAAGGGCTACACTAGTGTGATGAGTAATGTTTTAGATGAGGAGGCTGCTGAGAAACAGCGAAAGAAGAACGTTGCTGCTGCAGCACAAGCACAGGCTCAGGCCGCGGCAATTCAAGTTCAAGTAATTAAGAAAACAAATGAAGCTGAGTTGAAAAATAATAAGGCTGCAGATAATGCAGCAGATAATAAGAGTAATGTTTTTGCGGAAAATGACCAGTCTCTCATATCTTCTTGTAATGTGAATCCGGCTGTGTTTCAAGGTGTATTTTGCCGCGATATTGCGGTGGTAGGGAACTTGTTGACGCAGGTGGGATTTAATCGTCCGATTCCGGTGAAGTATGAAGCATTGAGCTGCTAA 1713 0.4437 MAVTTHSLTATEKKHWWLTNRKIVEKYIKDARSLIATQEQNEVVSALNLLDAALAISPRLDHALELKARSLLYLRRFKDVADMLQDYIPSLRMSNEDPSSVSSGEGVKLLSSDSSIPDQSFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGEACCHLGLMEDAMVLLQTGKRIASAAFRRESVCWSDDSFPLLTIPIAGDTPNQQPTTPPRAPLNETESVTHLLSHIKFLLRRRAAALAALDAGLYSEAIRHFSKIVDGRRAAPQGFLAECYMHRASAHRSAGRIAESIADCNRTLSLDPTCIQALETRASLFETIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRLSSGGITSVDYYALIGVRRGCSRSELERAHLLLCLRHKPDKATNFIERCEFADERDIETVKEKAKMCSLLLYRLIQKGYTSVMSNVLDEEAAEKQRKKNVAAAAQAQAQAAAIQVQVIKKTNEAELKNNKAADNAADNKSNVFAENDQSLISSCNVNPAVFQGVFCRDIAVVGNLLTQVGFNRPIPVKYEALSC* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0476 570 Coils Coil 463 483 - -
Tpr6g0476 570 SMART tpr_5 271 304 IPR019734 GO:0005515
Tpr6g0476 570 CDD DnaJ 386 420 IPR001623 -
Tpr6g0476 570 PANTHER - 1 570 - -
Tpr6g0476 570 Gene3D Tetratricopeptide repeat domain 206 344 IPR011990 GO:0005515
Tpr6g0476 570 SUPERFAMILY TPR-like 237 332 IPR011990 GO:0005515
Tpr6g0476 570 SUPERFAMILY Chaperone J-domain 383 420 IPR036869 -
Tpr6g0476 570 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 570 - -
Tpr6g0476 570 Gene3D DnaJ domain 374 512 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0476 Tpr-Chr6 3938417 3941518 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0476 - - gmx:100808420 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0476 6 3938417 3941518 Tpr1g2246 1 25231282 25234112 PCT