Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0474 ATGGAGCGGTTAAACCAACATCACTTCCCATTCCATACATTACATTGTTTTTCACACCTCTCTTTTCACAACTTCACACACCAACTCTCTCCCACTTTCTCTCTATCATTATCCTTTCTTATGGGAAACCATATTTCATTTCATGCAACAACTAAAATTATTTACTATGATGGTTCAATTCAAGAATTTGATCAACCAATAACAGTAGCAGAACTTATGTTAGAACATCCAAAACATGTTGTTGTTGAGTTTCATTCAGCAGTAAACCAAAAAAAACCAACACCATTACCAGCTGACAAGAATCTAGAAATGAACAAAAAATATGTTATGGTTCCAATGAAACCAGGGAAGCCTATAGGATTAAGCGCGGAAGATTGTCGTCGAATAGTTAATTCTTCTTTGCATTCAAATTATCTCATGCGTTCTCAAGGGTTGATTCCTTGGCTTGTAAGGTTTATGAAGAAAAAGAAGGTTGAAATTGGAGAAGTTGAAACAAGTTTGCAGATAAATGAGGAAGAGAGGTTTGAATTTTGTGAGTTTTTGCCAGAAATGATGGAAGAGAGAGCAGAGTATTTGAATTTGAGTAGGCAATTGTCAGGGAAAGGGTGGAAGCCTAGTTTGGATACTATTAAGGAAAAGAAGGTTGAGAAAAAGCTATCTGGTTGGTTATTTCTCAGAAGTGCTTTTATTGGTACAAAGATTTGA 705 0.356 MERLNQHHFPFHTLHCFSHLSFHNFTHQLSPTFSLSLSFLMGNHISFHATTKIIYYDGSIQEFDQPITVAELMLEHPKHVVVEFHSAVNQKKPTPLPADKNLEMNKKYVMVPMKPGKPIGLSAEDCRRIVNSSLHSNYLMRSQGLIPWLVRFMKKKKVEIGEVETSLQINEEERFEFCEFLPEMMEERAEYLNLSRQLSGKGWKPSLDTIKEKKVEKKLSGWLFLRSAFIGTKI* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0474 234 Pfam PADRE domain 41 212 IPR025322 -
Tpr6g0474 234 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 41 221 - -
Tpr6g0474 234 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 41 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0474 Tpr-Chr6 3852477 3853327 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0474 - - var:108328709 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0474 6 3852477 3853327 Tpr1g2247 1 25250203 25251085 PCT