Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2247 ATGGGAAACCATGTCTCATTTCGTCCTTCGGATTCAACCGGTAAAGTTATTTTCTTAGATGGTTCGGTTCATGAATTCGACGAACAAATAACAGTTGCGGAGTTAATGATGGATCATCCACAAAAAGTAGTAGTTGAGTTTCAATCAGCTGTAAATCAGAAAAGACCAACACCATTGCCAGCTGATAAGAAGCTAGAAATGAAAAAGATTTATCTTATGCTTCCTGTGAAGCAAGGGAAGCCTATAGGTTTAAGTAGCCAAGAAACGCGTCGCGTTCTTTTGATGGTTAATTCTGTTTTGAATTCTAATTATGTTTTGTGTTCTTCTAAGTTTCTTCCTTGGTTTAGTAGTTTGTGTCATAGTAGTGGAATTGTGGAGCCTCAGAGAAAGGAAGATGTGGAGGAGGAGGAGAAGAAGGGAGAGGGAAGCAGTTTTTCGGAGAATTTGCCGGATATTTTGGAAGGGAGGCCTGAGTTTTTGAATAGGCAGATTTCAAGAAAAGGGTCATGGAAGCCTAGTTTGGATACTATTAAGGAGAAGATTATTGAGAAAAAACATAGTCATTGGTTGTTTCTCAAGAGTTCAAGTGGTAGTAATTTTAGTTTTGATTAG 612 0.3824 MGNHVSFRPSDSTGKVIFLDGSVHEFDEQITVAELMMDHPQKVVVEFQSAVNQKRPTPLPADKKLEMKKIYLMLPVKQGKPIGLSSQETRRVLLMVNSVLNSNYVLCSSKFLPWFSSLCHSSGIVEPQRKEDVEEEEKKGEGSSFSENLPDILEGRPEFLNRQISRKGSWKPSLDTIKEKIIEKKHSHWLFLKSSSGSNFSFD* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2247 203 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 189 - -
Tpr1g2247 203 MobiDBLite consensus disorder prediction 126 144 - -
Tpr1g2247 203 Pfam PADRE domain 1 179 IPR025322 -
Tpr1g2247 203 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 189 - -
Tpr1g2247 203 MobiDBLite consensus disorder prediction 126 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2247 Tpr-Chr1 25250203 25251085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2247 - - gmx:100784884 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2247 1 25250203 25251085 Tpr1g2247 1 25250203 25251085 ECH
Tpr6g0474 6 3852477 3853327 Tpr1g2247 1 25250203 25251085 PCT