Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0468 ATGGAAACCCCACCATTAGACGACAAAGCAAAAAGAATGAGAGATCTCCTCTCCAGTTTCTATTCTCCACACCCCTCTGGCTCCCCTAACATGTCCTCAAAATACACCTCTTCCGATGACATCAACTCTTCATCCTTCCAAAGTGATCACTACATGAATGTTATGGTACATGAATTTAATTTGGAAGAGTTGCTCCATAAGCATGTTGATATGGTTACTGAAATAAAGAATCTCGATACCGATTTGCAAATGCTTGTCTACGAGAATTACAATAAATTCATTTGCGCTACAGATTCTATAAAGAGGATGAAAAGCAATATTATAGGGATGGAGGGGGAAATGGAACAACTTCTTGACAAGATAATGTTTGTCCAGTCAAGGAGTGACAATGTTAACACATCTTTGTCTGAAAATAGAGAGCATATAGAGAAATTGAATAAGAAATGTAATCTTCTTCGTAAAATTCAGTTCATATATGACTTACCTGATAGATTAGGCAAGTGCATCAAAGTTGAGGCATATGCAGATGCAGTCAAGATGTACACCGGTTCAATGCCCATTTTTAAGACATATGGAGACTCGTCATTCCAAGATTGCAAGCAAGCATCTGATGAAGCAATATCTATCATAGTAAAAAATTTACAGGAAAAACTACTTTCAGATTCTGAATCAACTCAAGTGAGGGCCGAAGCTGCAATTCTCCTTAAGAAGTTGGATATTCCGGTGGACAATTTAAAGGCAAATTTACTAGAGAAATTGGAACATTTTCTTATAGACATTCAGTTGATCCCTGAAGTAGTAGAGATTGTTTCACCTTCTTCGCACGAGGTAGCCTTTCACGAGTTTGTGGAGGCCGTTCGTGCATTTCAGAACATATTTCCCGATTCAGAAATGCAGTTAGTTAAACTTGGCCTAGATTTAGTAAACAAGAACTTTCTAATTGTTGAGGAGTACATGAAGACGCGGATTAGTGCAGAAGATCTACTTGGCGTTCTTCGAGTTATTTGGAATGATGTGCTTCAAATGGATGAAGTGTTACAAGAATCTTCCCTCTCTAATCATTCTCTCGAGGTCGCTGCCAAAGTTTCTATCAAGTCGTTCGTTAACATTACATTTTCTTATCTAATGCAAGATATATCAGATTTCGTATTAAATGTGTTGAAACGAGATGAAGGTGATCGTCACTCATTGAAAGATGCTCTAAATGCTAGCACAAAAACATTACTCCAAGGAAGCAAAAAGTTTATGGTGGATGTCTGCAAAATTCTTGACGACGGTGTAGAGATTCTAAATAAATCAAGAGATTTGATAATTGATTGGGTTAAAGAAGGGTTTCAAGACTTTTTTAGACAACTTTGTCTCCAATTTCAATTGTTTGCAGGAAGAAACGATTTTGCAGTTATTCAAAATCAGAGTTTGATAGAGGGATCTCAAGGTGACAAAGCTTTTCCTGGTCTTGTGTTGGTGTTGGCAAAGCTATCCGCTTTCATTGAACAGTCTGCCATTCCAAAAATCAACAAGGAACTAGCAGCTTCTTTTTCTTGTAGTAGTGTTAGAAAACATGGACTTTTTGTTTCGGAAGGGATCTCTCAAAAGTTCGGGACTGTCGGTGAAAGTTTCTTGCATAAGTATATTAAAATGAGAACTCAACGGATATCGCTTATTCTAAAGAAGAGGTTTACCACGCCTAATTGGGTAAAACATAAGGAGCCTAGAGAAGTCCACATGTTTGTGGATTTGTTTCTACAAGAGCTAAAAGTTATAGGTAATGAAGTGAATGAGACTTTGCCTAAAGGCATGCAGAAACACCAGAGAGCTGATAGTGCCTGTAGTAGTAATTTATCATTGTCAAGAAGCAACTCCATTCCAGATGAGATGTTGAGTAGGTCAAATAGTAGGTCAAATACTCAAAAGGGAAGGAACCAACAATACTTTGAAACACATTTGGCCAAACTATTCAAGCAAAAAGTTGAAATTTTCACAAAAGTAGAATATACACAGACATCAGTTCTTATGACCATGGCTAAATTATGTCTCAAGAGTTTACAAGAATTTGTTAGACTACAGACATTTAATCGGAGTGGATTCCAGCAAATTCAATTGGATATTCAATTCTTGAGGACTCCATTAAAAGAAATAGTTCAAGATGAAGCTACAACAGACTTCTTACTTGATGAGGTGAATGTTTCCGCTGCAGAACGATGTTTAGATCCAATTACATTGGAGCTCCCAATATTAGACAAACTTATACGAGCAAAGTTGACAAAAACTTGA 2274 0.3703 METPPLDDKAKRMRDLLSSFYSPHPSGSPNMSSKYTSSDDINSSSFQSDHYMNVMVHEFNLEELLHKHVDMVTEIKNLDTDLQMLVYENYNKFICATDSIKRMKSNIIGMEGEMEQLLDKIMFVQSRSDNVNTSLSENREHIEKLNKKCNLLRKIQFIYDLPDRLGKCIKVEAYADAVKMYTGSMPIFKTYGDSSFQDCKQASDEAISIIVKNLQEKLLSDSESTQVRAEAAILLKKLDIPVDNLKANLLEKLEHFLIDIQLIPEVVEIVSPSSHEVAFHEFVEAVRAFQNIFPDSEMQLVKLGLDLVNKNFLIVEEYMKTRISAEDLLGVLRVIWNDVLQMDEVLQESSLSNHSLEVAAKVSIKSFVNITFSYLMQDISDFVLNVLKRDEGDRHSLKDALNASTKTLLQGSKKFMVDVCKILDDGVEILNKSRDLIIDWVKEGFQDFFRQLCLQFQLFAGRNDFAVIQNQSLIEGSQGDKAFPGLVLVLAKLSAFIEQSAIPKINKELAASFSCSSVRKHGLFVSEGISQKFGTVGESFLHKYIKMRTQRISLILKKRFTTPNWVKHKEPREVHMFVDLFLQELKVIGNEVNETLPKGMQKHQRADSACSSNLSLSRSNSIPDEMLSRSNSRSNTQKGRNQQYFETHLAKLFKQKVEIFTKVEYTQTSVLMTMAKLCLKSLQEFVRLQTFNRSGFQQIQLDIQFLRTPLKEIVQDEATTDFLLDEVNVSAAERCLDPITLELPILDKLIRAKLTKT* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0468 757 PANTHER LOW QUALITY PROTEIN: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 51 HOMOLOG 3 726 - -
Tpr6g0468 757 Pfam Vps51/Vps67 41 125 - -
Tpr6g0468 757 Coils Coil 100 120 - -
Tpr6g0468 757 Coils Coil 751 757 - -
Tpr6g0468 757 MobiDBLite consensus disorder prediction 605 640 - -
Tpr6g0468 757 MobiDBLite consensus disorder prediction 602 640 - -
Tpr6g0468 757 PANTHER UNCHARACTERIZED 3 726 IPR014812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0468 Tpr-Chr6 3804994 3810806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0468 K20296 - gmx:100779149 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0468 6 3804994 3810806 Tpr1g2252 1 25315326 25323078 PCT