Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0466 ATGGCAACAATAACTGGTCTAAGCCTTTCAAATCCCAAATTTTTCTTCAACTCATCACCAATATTTCAACAAAATACCCAATCCATCAAGCTCTCATCAGCATCACCACTGCAAACACGGCGAGCTATGATCGGGTCGGGTCGGATAACAATTGTTCGTCCCGTTCGCGCTGCACCGGAACAGATATCAAAGAAAGTAGAAGAGAGCATAAAGAGTGCACAAGAGACATGTGCTGATGATCCAGTTAGTGGTGAATGCGTTGCGGCGTGGGATGAGGTGGAGGAACTCAGTGCTGCGGCGAGTCATGCGAGGGATAGGAAGAAGGAATCTGATCCGTTGGAGGATTACTGTAAGGATAATCCAGAGACTGATGAGTGCAAAACTTATGATAATTGA 396 0.4571 MATITGLSLSNPKFFFNSSPIFQQNTQSIKLSSASPLQTRRAMIGSGRITIVRPVRAAPEQISKKVEESIKSAQETCADDPVSGECVAAWDEVEELSAAASHARDRKKESDPLEDYCKDNPETDECKTYDN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0466 131 SMART CP12_2 62 131 IPR003823 -
Tpr6g0466 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 130 IPR039314 -
Tpr6g0466 131 MobiDBLite consensus disorder prediction 100 131 - -
Tpr6g0466 131 Pfam CP12 domain 62 130 - -
Tpr6g0466 131 PANTHER CALVIN CYCLE PROTEIN CP12-1 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0466 Tpr-Chr6 3797319 3797927 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0466 - - gmx:100812168 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0466 6 3797319 3797927 Tpr1g2254 1 25340118 25340879 PCT