Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2254 ATGGCAGCAACAATGGCTGGTGTGAGTCTTTCAACTCCTAGAGTTCTTATCAAAGGACCAGAGTCACTACAAAAGTCTCAAACCATCAGGTTCGCACCGGTGTCGATGCTCAACCAAAGGTGGACCGGTAATGCCAGTTCGTGCAGGATGGTAACCTTTCGACCGGTTCAGGCAGTACCAGAGAGCAAAACTGGGAGTGTCGAAGAGAGCATAAAGAATGCTGAGGAGGCGTGTGCAGGAGATGCCACTACCGGTGAGTGTGTGGCAGCATGGGATGAGGTGGAGGAACTAAGTGCGGCGGCAAGCCATGCAAGGGATAAGAAGAAATTAGATTCTGACCCTCTTGAGACATACTGCAAGGACAACCCAGAGACTGATGAGTGTCGTACCTATGATAACTGA 402 0.5025 MAATMAGVSLSTPRVLIKGPESLQKSQTIRFAPVSMLNQRWTGNASSCRMVTFRPVQAVPESKTGSVEESIKNAEEACAGDATTGECVAAWDEVEELSAAASHARDKKKLDSDPLETYCKDNPETDECRTYDN* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2254 133 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 3 132 IPR039314 -
Tpr1g2254 133 Pfam CP12 domain 66 132 - -
Tpr1g2254 133 SMART CP12_2 67 133 IPR003823 -
Tpr1g2254 133 PANTHER CALVIN CYCLE PROTEIN CP12-1 3 132 - -
Tpr1g2254 133 MobiDBLite consensus disorder prediction 101 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2254 Tpr-Chr1 25340118 25340879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2254 - - ccaj:109814754 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0466 6 3797319 3797927 Tpr1g2254 1 25340118 25340879 PCT