Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0377 ATGGAAAATCAAGAGGAAACAGAAGAACTCAAGCTTCTTGCTGAATGGAAGAGAAAGAAAGGTGGATTTAGAGCTTCCATGTTTATATTTGTTTTGTCAGCATTGGACAACATGGGTTTTGTTGCAAACATGGTTAGCTTAGTTCTATACTTCTATGGAGTGATGCATTTTGATCTATCAAGTTCTGCAAATACTCTCACAAACTTTATGGGTTCAACTTTCTTGCTTTCACTTGTTGGTGGTTTCATCTCAGATACTTATTTGAATAGATTCACCACTTGCTTGATTTTTGGATCACTAGAAGTTCTTGCTTTGGCAATGGTTACTTTTCAAGCTGCTTCAGATCATTTACATCCAAATGCATGTGGGAAATCAAGTTGTATGAAAGGTGGAATAGGATTCATGTTTTACACATCATTGAGTTTATTGGCATTAGGTATTGGAGGAGTAAGAGGATCTATGACTGCATTTGGTGCTGACCAATTTGAAGAAAAAGATCCAAATGAAGCAAAAGCTCTTGCTAGCTTTTTCAATTGGCTTTTACTTAGTTCAACTCTTGGAGCAATTACTGGTGTTACTGGTGTTGTTTGGGTTAGTACTCAAAGAGCTTGGCATTGGGGATTTTTCATAATTACCATTGCTTCTTCTATTGGTTTTGTTACTCTTGCTCTTGGGAAACCTTTCTATAGAATCAAAACTCCAGGAGATAGTCCTATAATCAGAATTGCTCAGGTTATTGTTGTGGCATTTAAAAACCGAAAGCTGTCAGAACCAGGATCACACGAAGAACTATATGAAATGAGTGACAAAGATGCAACAGTAGAGAAAATTGTTCACACAAAACAAATGAGGTTTCTTGATAAAGCAGCAATTCTTCAAGAAAACATGAAACCACAACCATGGAAAGTGTGCACAGTTACACAAGTTGAAGAAGTGAAAATCCTAACAAGAATGTTACCAATAGTAGCTAGCACAATTATCATGAACACTTGTTTAGCACAACTTCAAACATTCTCAGTACAACAAGGAAACACAATGAACCTTAAACTTGGTTCATTTACAGTTCCAGCATCATCAATTCCTGTCATCCCTCTTATTTTCATAAGCATCTTAGTTCCAATTTATGAACTTTTCTTTGTTCCATTTGCAAGAAAAATCACTAATCACCCTTCAGGAATCACACAGCTACAAAGGGTAGGTGTTGGATTAGTACTTTCAGTGATATCAATGACAGTAGCTGGAATTGTTGAAGTGAAAAGAAGAGACCAAGGTAGAAAAGACCCAAATAACCCTATAAGCCTATTTTGGCTTTCATTCCAATATGGCATATTTGGTATTGCTGATATGTTCACACTTGTGGGACTATTGGAATTTTTTTATAGGGAATCACCTTCAAGTATGAAATCATTGTCAACATCTTTTACATGGTTATCTATGTCAATTGGTTACTTCTTAAGCACTGTTTTTGTCAATTTGATTAATGTTGTTACAAAAAGGATTACTCCTAGTAAACAAGGTTGGTTACATGGGTTTGATTTGAATCAAAGTAATTTGAACCTTTTCTATTGGTTCTTAGCTATACTAAGTTGTCTTAATTTTTTCAACTATCTTTATTGGGCCTCAAGATATAAGTACAAATCTGAAGACCAAGATTCAAGCTCAATAGGTTTGAAGAGTTTACATGAAATGCCTCACAAAATGATTGGTGGGACAAAACAAAATTGGGAAGGTAACATTGGTGGAAACATTCAAGATTGA 1758 0.3527 MENQEETEELKLLAEWKRKKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSSSANTLTNFMGSTFLLSLVGGFISDTYLNRFTTCLIFGSLEVLALAMVTFQAASDHLHPNACGKSSCMKGGIGFMFYTSLSLLALGIGGVRGSMTAFGADQFEEKDPNEAKALASFFNWLLLSSTLGAITGVTGVVWVSTQRAWHWGFFIITIASSIGFVTLALGKPFYRIKTPGDSPIIRIAQVIVVAFKNRKLSEPGSHEELYEMSDKDATVEKIVHTKQMRFLDKAAILQENMKPQPWKVCTVTQVEEVKILTRMLPIVASTIIMNTCLAQLQTFSVQQGNTMNLKLGSFTVPASSIPVIPLIFISILVPIYELFFVPFARKITNHPSGITQLQRVGVGLVLSVISMTVAGIVEVKRRDQGRKDPNNPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPSSMKSLSTSFTWLSMSIGYFLSTVFVNLINVVTKRITPSKQGWLHGFDLNQSNLNLFYWFLAILSCLNFFNYLYWASRYKYKSEDQDSSSIGLKSLHEMPHKMIGGTKQNWEGNIGGNIQD* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0377 585 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr6g0377 585 Gene3D MFS general substrate transporter like domains 2 552 IPR036259 -
Tpr6g0377 585 SUPERFAMILY MFS general substrate transporter 135 549 IPR036259 -
Tpr6g0377 585 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 557 - -
Tpr6g0377 585 Pfam POT family 91 506 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr6g0377 585 SUPERFAMILY MFS general substrate transporter 24 229 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0377 Tpr-Chr6 3065392 3069659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0377 1 552 Organic Solute Cotransporters AT1G69850 40.641 1.68e-147 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0377 K14638 - aprc:113861407 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0377 6 3065392 3069659 Tpr6g0377 6 3065392 3069659 ECH
Tpr6g0377 6 3065392 3069659 Tpr1g2343 1 26268855 26273407 PCT