Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2343 ATGGTAGACAAAGAAGTGAAAGAAGAACACAAACCAATCATTGAATGGAAGAAACAAAAGGGTGGATTTAGAGCTTCCATGTTCATCTTTGTTTTGTCAGCATTGGATAACATGGGTTTTGTGACAAACATGGTGAGCTTAGTTCTATACTTTTATGGTGTGATGCACTTTGATCTTTCAAGCTCTGCAAATACTCTGACAAATTTCATGGGCTCAACTTTCTTGCTCTCCCTTGTTGGTGCTTTCATCTCAGATACTTACCTCAACAGATTAACCACATGTTTGCTTTTTGGATCACTAGAAGTTATTGCTTTGGTAATGATCACAATTCAAGCTGCATTAGACAAACTACACCCTGAAGCATGTGGTAAATCAAGCTGTGTAAAAGGAGGTATAGCTGTGATGTTTTACACATCATTGTGTTTATATGCTTTGGGTATGGGTGGAGTAAGAGGTTCAATGACAGCATTTGGTGCTGATCAATTTGATGAAAAGGAACCAAATGAAGCAAAAGCACTTGCAACTTTTTTTAATTGGCTTTTACTTAGTTCAACTTTAGGTTCAGTTATTGGTGTTACTGGTGTTGTTTGGGTTAGCACACAAAAAGCTTGGCATTGGGGATTTTTAATCATCACAGTTTGTTCTTCAATTGGTTTTGTAACACTTGCTCTTGGTAAATCATTCTACCGTATCAGAGTTCCCGGTGAAAGCCCTATTTTAAGGATTGTCCAGGTTATTGTTGTGGCTTTTAAGAACAGAAAACTACCACTACCAGAGACTAATGAACAACTTTATGAAGTGTATAAAGATGCTACTACTTTAGAGAAGATTGCACATACAAATCAAATGAGGTTTCTAGATAAAGCAGCAATTCTTCAAGAAAACACTGAACCTCAAAAACCATGGAAGGTTTGCACAGTTACACAAGTTGAAGAAGTAAAAATCCTAACAAGAATGTTACCTATCTTAGCCAGTACAATTGTAATGAACACATGTTTAGCACAACTTCAAACATTCTCAGTTCAACAAGGGAACTCAATGAACCTTAAACTTGGTTCCTTCACAGTACCTGCATCATCCATTCCTGTTATCCCTCTTATTTTCTTATGCACATTGATACCAATTTATGAACTTTTCTTTGTACCATTTGCAAGAAAAATCACTCATCACCCTTCAGGTGTTACACAGCTTCAAAGGGTCGGTGTTGGATTAGTACTCTCTTCGATTTCAATGACTATAGCTGGTATCATTGAAGTTAAAAGAAGAAACCAAGGATTAAAAGACCCTTCAAAACCAATAAGCCTATTTTGGTTATCTTTTCAATATGCTATATTTGGTATTGCAGACATGTTCACTCTTGTTGGACTATTAGAATTCTTCTACAGAGAAGCACCTTCAACCATGAAATCACTTTCAACTTCATTCACATTTTTATCTATGTCACTTGGTTACTTCTTAAGTACAGTTTTTGTTAATGTTATTAATGCTGTTACTAAAAGGATTACACCAAGTAAACAAGGTTGGTTACATGGTTTTGATTTAAATCAAAACAATCTAAACTTGTTTTATTGGTTCTTAGCTATCTTAAGCTGTCTTAATTTCTTTAACTTTGTTTATTGGGCCTCTTGGTACAAGTACAAATCAGAAGATAGTAACAACAGTTCAATGGTAATCACAAAGGAATTATTAGGTGAAACACCTCTATTAATGGTTGGTGAAAGAAAACATGATGATGAAGATAAAGAAGAAGATGAAGACAAGAAATATGATCATAAAGTTAAGGCCAAAGAAAGTAGCCAAACTAGTGAAGCCAATACTGAGGGACCCTCTTCTTCTGATGAAACAGATGATGGACAAAAGAAAGAAAGAAACAGTAGAGAATGGAAGCATAGATAA 1896 0.3523 MVDKEVKEEHKPIIEWKKQKGGFRASMFIFVLSALDNMGFVTNMVSLVLYFYGVMHFDLSSSANTLTNFMGSTFLLSLVGAFISDTYLNRLTTCLLFGSLEVIALVMITIQAALDKLHPEACGKSSCVKGGIAVMFYTSLCLYALGMGGVRGSMTAFGADQFDEKEPNEAKALATFFNWLLLSSTLGSVIGVTGVVWVSTQKAWHWGFLIITVCSSIGFVTLALGKSFYRIRVPGESPILRIVQVIVVAFKNRKLPLPETNEQLYEVYKDATTLEKIAHTNQMRFLDKAAILQENTEPQKPWKVCTVTQVEEVKILTRMLPILASTIVMNTCLAQLQTFSVQQGNSMNLKLGSFTVPASSIPVIPLIFLCTLIPIYELFFVPFARKITHHPSGVTQLQRVGVGLVLSSISMTIAGIIEVKRRNQGLKDPSKPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPSTMKSLSTSFTFLSMSLGYFLSTVFVNVINAVTKRITPSKQGWLHGFDLNQNNLNLFYWFLAILSCLNFFNFVYWASWYKYKSEDSNNSSMVITKELLGETPLLMVGERKHDDEDKEEDEDKKYDHKVKAKESSQTSEANTEGPSSSDETDDGQKKERNSREWKHR* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2343 631 MobiDBLite consensus disorder prediction 573 631 - -
Tpr1g2343 631 Pfam POT family 93 507 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr1g2343 631 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 558 - -
Tpr1g2343 631 Gene3D MFS general substrate transporter like domains 1 553 IPR036259 -
Tpr1g2343 631 SUPERFAMILY MFS general substrate transporter 12 549 IPR036259 -
Tpr1g2343 631 MobiDBLite consensus disorder prediction 613 631 - -
Tpr1g2343 631 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 558 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tpr1g2343 631 MobiDBLite consensus disorder prediction 573 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2343 Tpr-Chr1 26268855 26273407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2343 5 557 Organic Solute Cotransporters AT1G59740 41.125 1.26e-149 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2343 K14638 - gmx:100812867 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2343 1 26268855 26273407 Tpr1g2343 1 26268855 26273407 ECH
Tpr6g0377 6 3065392 3069659 Tpr1g2343 1 26268855 26273407 PCT