Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0368 ATGGCTTCCAACAACACCAATCACCACCGTTCAATCACAGACATCAACGGCTCACATCCAATCCCCAAAAAACCCAAACTCTCTTCTTCTTCTTCTTCATCTTTCATAACCGTTTCCGAAATTGAATCTGAATTCTCCCACCACGACACCACCATCGCTCGCATCAACAACGGCAGCTTCGGCTCCTGTCCATCCTCCATCATCTCCGCTCAACAACAATGGCAACTCAAATATCTCCGTCAACCAGATCACTTCTACTTCAACTATCTCAAACCAGCTATCAACAATTCTCGCTCAATTATCAAAGATTTAGTCAACGCTCAAAACCTCGACGAAATTTCAATCGTCGATAACGCAACCACCGCTGCTGCTATCGTTCTTCAACATACCGCTTGGTGTTTTCGTGAAGGTAAATTCAATAAAGGTGATGTAGTTGTTATGCTTCATTATGCTTATGGTGCTGTTAAGAAATCTATGGAAGCTTATGTTACTCGTGCTGGTGGAAAAGTAATTGAAGTTCCTCTTCCTTTTCCGGTGAATTCTAATGATGAGATTGTTACTGAATTTAGAAAAGCTTTGGAGAAAGGAAAAATCGATGGAAAAAAAATTAGGTTAGCTGTGATTGATCATGTTACTTCTATGCCTTGTGTTGTTATTCCTGTTAAGGAATTGATTCGAATTTGTAGAGATGAAGGTGTTGAACAGGTTTTTGTTGATGCTGCTCATTCGATTGGATGTGTTGATGTTGATATGCAAGAGATTGGTGCTGATTATTATACTAGTAATTTGCATAAGTGGTTTTTTTGTCCACCTTCGATTGCGTTTTTGTATACTAAGAAGAACCCTAAAAGTGGTGGTAGTGATTTGCATCATCCTGTGGTGTCTCATGAGTATGGAAATGGATTGGCTGTGGAAAGTGCTTGGATTGGGACAAGGGATTATAGTGCTCAATTGGTGGTTCCAAATGCTTTGGAGTTTGTGAATAGGTTTGAAGGTGGTATTGAAGGGATTAAGAAGAGAAATCATGAAGTTGTTGTTGAGATGGGAGATATGTTGGTTAAGGCTTGGGGAACTCATCTTGGGAGTCCTGCACATATGTGTGCTAGTATGGTTATGGTTGGTTTGCCTACTTGTTTGGGGATTCGTAGCGATGCTGATGCACTCAAGTTGAGGGCACATTTGAGGGATGTTTTTGGAGTTGAAGTTCCTATATACTATAGACCACCTAGAGATGGAGAAGTTGATCCTGTAACGGGGTATGCTCGGATTTCTCATCAGGTTTACAATAAAGTTGAGGATTATTACAAGTTTAGGGATGCTGTTAACCAACTTGTGGATAATGGGTTTGCTTGTACACTTCTTTCCGGTTGA 1371 0.4055 MASNNTNHHRSITDINGSHPIPKKPKLSSSSSSSFITVSEIESEFSHHDTTIARINNGSFGSCPSSIISAQQQWQLKYLRQPDHFYFNYLKPAINNSRSIIKDLVNAQNLDEISIVDNATTAAAIVLQHTAWCFREGKFNKGDVVVMLHYAYGAVKKSMEAYVTRAGGKVIEVPLPFPVNSNDEIVTEFRKALEKGKIDGKKIRLAVIDHVTSMPCVVIPVKELIRICRDEGVEQVFVDAAHSIGCVDVDMQEIGADYYTSNLHKWFFCPPSIAFLYTKKNPKSGGSDLHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPNALEFVNRFEGGIEGIKKRNHEVVVEMGDMLVKAWGTHLGSPAHMCASMVMVGLPTCLGIRSDADALKLRAHLRDVFGVEVPIYYRPPRDGEVDPVTGYARISHQVYNKVEDYYKFRDAVNQLVDNGFACTLLSG* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0368 456 Gene3D - 64 329 IPR015421 GO:0003824
Tpr6g0368 456 Pfam Aminotransferase class-V 89 371 IPR000192 -
Tpr6g0368 456 SUPERFAMILY PLP-dependent transferases 50 445 IPR015424 -
Tpr6g0368 456 MobiDBLite consensus disorder prediction 1 29 - -
Tpr6g0368 456 PANTHER L-CYSTEINE DESULFHYDRASE 18 455 - -
Tpr6g0368 456 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 18 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0368 Tpr-Chr6 2952415 2956785 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0368 K22207 - gmx:100793745 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0368 6 2952415 2956785 Tpr6g0368 6 2952415 2956785 ECH
Tpr6g0368 6 2952415 2956785 Tpr1g1343 1 12299283 12301009 PCT