Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1343 ATGGCCTTCCACGATCAAAATCACAAAAACGGCAACCTTTCAAAGAAACCAAAGCTCTGTATCTCTCCGATCACCGACGCTGAGATTCAATCAGAATTCTCCCACCATGACCCCAACATAGCACGCCTCAACAACGGAGCCTTCGGTTGCTGTCCATCCTCCGTCCTCGCAGCTCAACATGAATTGCAGCTCAAATTCCTCCGTCAACCCGATCACTTCTATTTCAACTACCTCAAAAAAGGAATCCTCCATTCCCGAACCATCATCAAAGAACTCGTCAACGCCCAACACCTAGATGAAATCTCCATTGTGGATAATGCCTCCACTGCCACCACAATTGTTCTTCAGCAAGCATCATGGGCTTTCCATGAAGGAAAGTTCAATAAAGGAGATGCTGTCGTCATGCTTCACTATGCTTACGGCTCCGTCAAGAAAGCTATTGAAGCGTACGTCACACGTGCTGGTGGTAGAGTCATCGAGGTTCCACTCGCTTTTCCCGTTAACTCCGAAGACGACATCATAAGAGAGTTCCGTCACGCGTTGGAAAAAGCAAAGAGCGAAGGTAGCAATACTAAAGTTAGATTGGCAGTTATCGATCACGTGACTTCTATGCCGAGCATGGTGATTCCGGTGAAAGAGTTAGTTAAGATTTGTAGAGAGGAAGGTGTTGAGCAAGTTTTCGTTGACGCGGCTCACGCGATTGGGTGCACACCGCGCGTTGATATGCAAGAGATTGGAGCTGATTTTTACGCAAGCAATATGCATAAGTGGTTTTTTTGTCCACCTTCGGTAGCATTTATCTACGCGCGTAAATCAGTTAATTCAGTTGATTTGCATCACCCTATCGTGTCACACCAGTACAGGAATGGATTAGCTATTGAAAGTTCATGGATTGGAAATAGAGACTATAGTTCTCAGTTAGTTGTTCCTGCTGTTATGGAATTTGTGAATAGATTTGAAGGTGGAATTGAAGGAATTAAAAAGAGGAACCATGATTGTGTTGTTGAGATGGGTGAGATGTTGGTGGAAGCTTGGGGGACACATCTTGGAACACCTCATCATATGAGTGCAAGTATGGTTATGGTTGGTTTGCCACCTTCTTTGAGGATTATGAATGATTGTGATGCTATTAATCTTAGGACACATTTGAGGGAGTTTTTTGGGGTTGAAGTACCTATTTATTTTAGAGATGGAGGGGAAGTTGGATGTGTAAGTGGATATGCTAGAATTTCTTATCAAGTGTATAATAAAGTTGATGATTATTACAAGTTTAGGGATGCAATTAACAAACTTGTAAGTGATGGATTCACTTGTGCTCTTCTTTCCACTTCAACTAATGGTAGTTTGCTTTACTAG 1356 0.4285 MAFHDQNHKNGNLSKKPKLCISPITDAEIQSEFSHHDPNIARLNNGAFGCCPSSVLAAQHELQLKFLRQPDHFYFNYLKKGILHSRTIIKELVNAQHLDEISIVDNASTATTIVLQQASWAFHEGKFNKGDAVVMLHYAYGSVKKAIEAYVTRAGGRVIEVPLAFPVNSEDDIIREFRHALEKAKSEGSNTKVRLAVIDHVTSMPSMVIPVKELVKICREEGVEQVFVDAAHAIGCTPRVDMQEIGADFYASNMHKWFFCPPSVAFIYARKSVNSVDLHHPIVSHQYRNGLAIESSWIGNRDYSSQLVVPAVMEFVNRFEGGIEGIKKRNHDCVVEMGEMLVEAWGTHLGTPHHMSASMVMVGLPPSLRIMNDCDAINLRTHLREFFGVEVPIYFRDGGEVGCVSGYARISYQVYNKVDDYYKFRDAINKLVSDGFTCALLSTSTNGSLLY* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1343 451 Gene3D - 68 319 IPR015421 GO:0003824
Tpr1g1343 451 Pfam Aminotransferase class-V 78 273 IPR000192 -
Tpr1g1343 451 PANTHER L-CYSTEINE DESULFHYDRASE 12 442 - -
Tpr1g1343 451 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 12 442 - -
Tpr1g1343 451 SUPERFAMILY PLP-dependent transferases 33 432 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1343 Tpr-Chr1 12299283 12301009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1343 K22207 - gmx:100796732 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0368 6 2952415 2956785 Tpr1g1343 1 12299283 12301009 PCT