Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0365 ATGGCAAATAAAGCTTCTCTATGCTTCTTGTTCCTCTCTTTTCTCATTTTCTTCTGTTCTGGAAACAATGCATTTTTAACTTTTTCTGGAACCAGATTCCTTAAAAAAAGCAAGATCTCAAAATCTCAGATTCAGTTATCTGTAAAAGATCATAACAATAGGATTATGAGAATTCTACAAGACACAGGTTTCCCTACAAATCCAGCATCAACTACACCTTCAGAAACACCAACAATAATCACAGTTCCATCAACCAATCCTGTTCCACCAACAAATCCAGGTACAACAAATCTAGTTCCTTCTACTACACCACCTGTTTCATCAGCACCACCAACAAATCCAGCAAATACACCAGTACCTGTTACAGCTCCAATAACAGTTCCAGGAACAGGAACAAACCCTGTGAATTCTTATCCACCACCAGCACCATTATCAGGAGGAACAGGAACAGTTCCTGTGACAAATCCTCCTCCTACTACAAGCACAGGCACAAATCCTCAAGGAGGAGGTAGTTGGTGTGTGGCTAAACCTGGAACACCACAAACTACACTACAAACAGCATTAGATTATGCTTGTGGAAAAGGTGCTGATTGTTCACAGATACAACAAGGTGGAAGCTGTTATAATCCAAATTCACTTCAAAATCATGCTTCTTTTGCTTTCAATAGTTACTATCAAAAGAATCCTGCACCTACTAGCTGTGACTTTGGAGGGGTTGCTGCTGTTGTTAGCATAAATCCTAGTACTGGAACTTGTATCTTCCCATCATCTTCAGGAGGAGCAAGCCCAACTACCGGCGGCTCTGGTACAACCTCACCTTCATTCGGTTTGGGGCCTCAAAGCTCTCCACTGGATTCCTCTCATTCAACTGGTCTGAGACCTTTCATAAGCTGCATGGTTCTGGTGACATTATTTGTCAGTGGAATGCTCAGTATGAGTCCATAG 945 0.4169 MANKASLCFLFLSFLIFFCSGNNAFLTFSGTRFLKKSKISKSQIQLSVKDHNNRIMRILQDTGFPTNPASTTPSETPTIITVPSTNPVPPTNPGTTNLVPSTTPPVSSAPPTNPANTPVPVTAPITVPGTGTNPVNSYPPPAPLSGGTGTVPVTNPPPTTSTGTNPQGGGSWCVAKPGTPQTTLQTALDYACGKGADCSQIQQGGSCYNPNSLQNHASFAFNSYYQKNPAPTSCDFGGVAAVVSINPSTGTCIFPSSSGGASPTTGGSGTTSPSFGLGPQSSPLDSSHSTGLRPFISCMVLVTLFVSGMLSMSP* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0365 314 Pfam X8 domain 172 240 IPR012946 -
Tpr6g0365 314 Gene3D - 169 258 - -
Tpr6g0365 314 SMART X8_cls 171 254 IPR012946 -
Tpr6g0365 314 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 98 275 - -
Tpr6g0365 314 MobiDBLite consensus disorder prediction 256 283 - -
Tpr6g0365 314 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 98 275 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0365 Tpr-Chr6 2933825 2936843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0365 143 256 Glycoside Hydrolase AT4G26830 48.276 4.59e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0365 - - ccaj:109798054 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0365 6 2933825 2936843 Tpr6g0365 6 2933825 2936843 ECH
Tpr6g0365 6 2933825 2936843 Tpr1g1349 1 12337016 12340297 PCT