Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0349 ATGACATCAATCAACCTTATTAGTAATTGTACCATGAAACCATCCTCTAGAATTCTCGGACTTGGTCGAAAGAATTCATCTTTTTTCTCAAGATGTTATCATTCTGTTACAATGTCAACATCATTCTGTAATAATCCTCTTTTTCTCAATCTTGATCGCAAAACCAAGCAATACCCTTCTCGCATTTTTGAATTTAAACGTGTAATGAATGGTTTTCAACAAGTTTTGCGGTTACCCTCTTGGAATTTAGGCCATTCAAGAACATTTCTTAATTTAAAAGCAACAAAAACAGAATGTGTATCGTCTATTGGTGGAGTATCTTTCAAGGCACGTGAATTCTCAAACTCTGTTGAAACCAAACGTGGTTTAAGAGTTGGTAAAGATGATAACAAGGGTGGAGGAGACGAGGAAGATTTGAAGGAAAAGAATTCGAAGAATGGATCCATTGCAAAGAAAAAATTTGATGACGAAGAAACAGAAGTGGAGAAAGAAGCATGGAAATTGTTGCAGAAAGCACTTGTTACTTATTGTGATACACCTGTGGGAACCGTTGCAGCAAATGATGATTCGGGATCGCCATTGAATTATGATCAAGTTTTTATTCGAGATTTTATCCCTTCTGCTCTTGCTTTCTTGCTCAAGGGTGAACATGAGATTGTCAAGAATTTCCTCCTTCACACCTTGCAACTTCAGAGTTGGGAGAAAACGGTGGATTGCTATAGCCCGGGACAAGGTTTGATGCCTGCAAGTTTCAAAGTTAAAACTATGGAATTTGATGACAAAAAGACAGGAGAAGTTTTAGATCCTGATTTTGGAGAATCGGCTATTGGTCGTGTTGCTCCTGTTGATTCAGGATTGTGGTGGATCATTCTGCTTAGGGCTTATGGGAAACTCACTGGTGACTATACCTTGCAAGAAAAGTTAGAAGTTCAAACGGGCTTACAAATGATCATTAACTTATGTTTATCAGATGGATTTGATATGTTTCCTTCTCTGTTAGTAACTGATGGATCTTGCATGATAGACAGAAGGATGGGTATACATGGTCACCCTCTTGAGATTCAAGCATTATTTTACTCGGCTCTTCGGTCAGCGCGCGAAATGGTTGTTTTGAATGATGAATCTAAGAATCTAGTTGGAGAAATTAACAATAGACTAAGTGCACTTTCTTTCCATATTAGAGAATATTATTGGTTGGATATGAGACAGGTGAATGAGATTTATAGGTATAAAACAGAAGAATACTCTTTAGATGCAACTAACAAGTTCAACATTTATCCTGAACAAATTCCAATGTGGTTAATGGATTGGATTCCTGAGGAAGGTGGTTATTTGATAGGAAATCTACAACCAGCTCACATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCAATTGTTTCATCTTTAGGTACACCAAAACAAAACAAGTCTGTTTTGAATCTCATAGAATCAAAATGGGATGATCTTGTTGGTGACATGCCTCTTAAGATATGTTATCCTGCCTTGGAGGCTGAAGAATGGCGCTTAATTACCGGCAGCGACCCTAAGAATACCCCGTGGTCATATCATAATGGCGGATCTTGGCCTACCCTTCTCTGGCAGTTCACGCTAGCATGCATCAAAATGGGGAGAACTAATCTAGCTGAGAAGGCTGTTGATTTGGCTGAGAAAAGGCTTCCAATTGATTCTTGGCCAGAATATTATGACACAAAAACAGGAAGATTTATCGGAAAACAAGCGCGACTTTTTCAAACATGGACATTGGCTGGATTCCTTGCATCTAAGATGCTTTTGAAGAATCCTGAAATAGCAACCTTGCTATGCTGGGATGAAGATCTTGATATTCTTGAAACATGTGTTTGTACACTTAATAAGAGTGGCAGAACAAAATGTTCTCGTGATGTCGCGAAGTCACACATTTTAGTGTGA 1935 0.3835 MTSINLISNCTMKPSSRILGLGRKNSSFFSRCYHSVTMSTSFCNNPLFLNLDRKTKQYPSRIFEFKRVMNGFQQVLRLPSWNLGHSRTFLNLKATKTECVSSIGGVSFKAREFSNSVETKRGLRVGKDDNKGGGDEEDLKEKNSKNGSIAKKKFDDEETEVEKEAWKLLQKALVTYCDTPVGTVAANDDSGSPLNYDQVFIRDFIPSALAFLLKGEHEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTMEFDDKKTGEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYTLQEKLEVQTGLQMIINLCLSDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVVLNDESKNLVGEINNRLSALSFHIREYYWLDMRQVNEIYRYKTEEYSLDATNKFNIYPEQIPMWLMDWIPEEGGYLIGNLQPAHMDFRFFMLGNLWSIVSSLGTPKQNKSVLNLIESKWDDLVGDMPLKICYPALEAEEWRLITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRTNLAEKAVDLAEKRLPIDSWPEYYDTKTGRFIGKQARLFQTWTLAGFLASKMLLKNPEIATLLCWDEDLDILETCVCTLNKSGRTKCSRDVAKSHILV* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0349 644 SUPERFAMILY Six-hairpin glycosidases 163 595 IPR008928 GO:0005975
Tpr6g0349 644 MobiDBLite consensus disorder prediction 124 144 - -
Tpr6g0349 644 Pfam Alkaline and neutral invertase 165 603 IPR024746 GO:0033926
Tpr6g0349 644 Gene3D - 194 591 IPR012341 GO:0005975
Tpr6g0349 644 PANTHER - 5 644 IPR024746 GO:0033926
Tpr6g0349 644 PANTHER ALKALINE/NEUTRAL INVERTASE 5 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0349 Tpr-Chr6 2800227 2803086 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0349 - - mtr:MTR_7g111890 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1358 1 12414961 12419009 Tpr6g0349 6 2800227 2803086 ECH
Tpr6g0349 6 2800227 2803086 Tpr6g0349 6 2800227 2803086 ECH
Tpr6g0349 6 2800227 2803086 Tpr1g1358 1 12414961 12419009 PCT