Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1358 ATGAACACAATAACCCTAATTCGTAACCGCGCCATAAATTCCGCGCGTAAACTCCTCATTGATTCTAAGAATTCATCGATTTTTGGCTCCCTACTACCTCATCACGCTCTTCCTGTACCTAACGATTTTCTTCAACCACGTTTCAATCTTTACCACAGCAAAAATCACTACCCTTTTCGAAAACTAGGGTTTCAGCATGAATTGGGTAGTGTCCGGAAAATTTTCAATCCATCCTCTTCAAATTATGCAACTTCAAGGTGTTTTAGTTTAAATTCAGCAAAAAGGGGTGCAAGAATTGGATTCAAGGTTCAAAATTTCTCAACTTCTGTTGAGACACGTGTTAATGACAATAGTTTTGAGAAAATTTACATTCAGGGTGGGTTGAATGTGAAGCCATTAGTGGTGGAAAGTGTTCATAATGATGAAGAGAGTGTTGTAAGAGAAGAAGAAGAAGAGAGTGTTGCGGAAAAACAAGCTTGGAAGTTGTTGAAGGATGCTATTGTTACTTATTGTGGAAATCCTGTGGGGACGGTGGCTGCAAATGATCCTGGTGATAAGTTACCATTGAATTATGATCAAGTGTTTATTCGGGATTTTATTCCTTCCGCGCTTGCTTTCTTGCTTAAAGGTGATAGTGAGATTGTTAAGTACTTTCTTCTTCATACCTTGCAATTGCAGAGTTGGGAGAAAACTGTGGACTGCTACAGTCCAGGACAGGGCTTGATGCCTGCTAGTTTCAAAGTTAGAACCGTAGCTCTTGAAGGAGATACTCGTGAAGAAGTTTTAGATCCTGATTTTGGTGAATCAGCTATTGGTCGAGTTGCGCCTGTAGATTCAGGATTGTGGTGGATCATCCTGTTGCGGGCTTATGGGAAGATCACGGGTGACTACAGCTTGCAAGAAAGGGTTGATGTTCAAACAGGCTTGAAAATGATTCTCAAATTGTGTCTAACAGATGGTTTTGATATGTTTCCATCTCTGCTAGTCACTGACGGGTCTTGCATGATAGACAGGCGTATGGGCATTCATGGTCACCCTCTTGAAATCCAAGCATTATTTTACTCGGCTCTTCGCTGCTCGCGTGAAATGCTTGCTGTAACAGATGGAACCAATGATCTTGTTAGAGCCATTAACAACAGATTGAGTGCATTATCGTTCCACATTAGACAATATTATTGGGTGGATATGAAAAAGATTAATGAAATATACAGGTACAAAACTGAAGAGTACTCCATGGATGCCATCAACAAATTCAACATCTATCCAGAGCAAATTCCTTTCTGGGTAATGGACTGGATTCCAGAAAAAGGTGGATATCTAATTGGGAATCTGCAACCTGCTCACATGGATTTCCGGTTTTTCACGCTGGGAAATCTTTGGTCTATTATTTCGTCACTGAGCACCCCAAGACAGAACGAGGCTATTTTAAATCTGATAGAAGCAAAATGGGATGATCTCGTAGGGCATATGCCTCTTAAGATATGTTATCCTGCCTTGGATAATGAAGAGTGGCGGATAATTACTGGTAGCGACCCAAAGAATACCCCTTGGTCATATCACAACGGTGGATCCTGGCCAACCCTTTTGTGGCAGTTCACATTGGCATGCATGAAAATGGGGAGAATTGATCTAGCCCAGAAAGCAGTTGATTTGGCTGAGAAAAGGCTGCCAGTTGATTCTTGGCCTGAATATTACGATACTCGTTCCGGGAAATTTATTGGTAAACAAGCCCGGCTGTATCAAACATGGACCATAGCTGGGTTCCTTACATCTAAGATGCTTTTGAAGAATCCAAAAATGGCATCCATGTTATTCAGTGAGGAGGATTATGATCTCCTTGAGATATGTGTTTGTGGTCTTAGCAAGAGTGGAAGGAAAAAATGCTCGCGTGTCGCTGCCAAGTCTCAGATTCTTGTATGA 1920 0.4141 MNTITLIRNRAINSARKLLIDSKNSSIFGSLLPHHALPVPNDFLQPRFNLYHSKNHYPFRKLGFQHELGSVRKIFNPSSSNYATSRCFSLNSAKRGARIGFKVQNFSTSVETRVNDNSFEKIYIQGGLNVKPLVVESVHNDEESVVREEEEESVAEKQAWKLLKDAIVTYCGNPVGTVAANDPGDKLPLNYDQVFIRDFIPSALAFLLKGDSEIVKYFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALEGDTREEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYSLQERVDVQTGLKMILKLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLAVTDGTNDLVRAINNRLSALSFHIRQYYWVDMKKINEIYRYKTEEYSMDAINKFNIYPEQIPFWVMDWIPEKGGYLIGNLQPAHMDFRFFTLGNLWSIISSLSTPRQNEAILNLIEAKWDDLVGHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACMKMGRIDLAQKAVDLAEKRLPVDSWPEYYDTRSGKFIGKQARLYQTWTIAGFLTSKMLLKNPKMASMLFSEEDYDLLEICVCGLSKSGRKKCSRVAAKSQILV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1358 639 SUPERFAMILY Six-hairpin glycosidases 167 590 IPR008928 GO:0005975
Tpr1g1358 639 Gene3D - 190 589 IPR012341 GO:0005975
Tpr1g1358 639 PANTHER - 6 639 IPR024746 GO:0033926
Tpr1g1358 639 Pfam Alkaline and neutral invertase 159 598 IPR024746 GO:0033926
Tpr1g1358 639 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 6 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1358 Tpr-Chr1 12414961 12419009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1358 - - gmx:100797025 1044.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1358 1 12414961 12419009 Tpr6g0349 6 2800227 2803086 ECH
Tpr1g1358 1 12414961 12419009 Tpr1g1358 1 12414961 12419009 ECH
Tpr6g0349 6 2800227 2803086 Tpr1g1358 1 12414961 12419009 PCT