Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0347 ATGTCATTGGTAACAGAGGAAATCAAATTGAAAGCAGAGATTTACCATGGTGACGAACTCTGTCAAGCGAAAGCGAAAGAGCTTCTAGAAGAAATTGCTCTTCCAAATGGTCTTTTACCATTGAAAGACATCATAGAAGTTGGTTACAACAGAGAAATAGGTTTTGTTTGGCTGAAACAGAAGAAAAGTATAACACATAAGTTTGAGAAAATTGGTAGAAATGTTTCATATGCTACTGAAGTTACTGCAGAAGTTGAAAAAGGTAAGATTAAGAAACTTAATGGTGTTAAAGCTAAAGAGCTTTTGATTTGGCTTACACTTAATGAGATTTATGTTGATGATCCACCAACTGGTAAAATCACTTTCAAAGCTTATTCTGGACTTTCTAGAACTTTCCCTGTTACTGCTTTTGAACTTGAAGAAGAGAAATCAAGTGGTGTCAAAGATGTCTAA 453 0.3444 MSLVTEEIKLKAEIYHGDELCQAKAKELLEEIALPNGLLPLKDIIEVGYNREIGFVWLKQKKSITHKFEKIGRNVSYATEVTAEVEKGKIKKLNGVKAKELLIWLTLNEIYVDDPPTGKITFKAYSGLSRTFPVTAFELEEEKSSGVKDV* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0347 150 SUPERFAMILY At5g01610-like 3 142 IPR036758 -
Tpr6g0347 150 Pfam Protein of unknown function, DUF538 25 138 IPR007493 -
Tpr6g0347 150 PANTHER T31J12.3 PROTEIN-RELATED 2 149 IPR007493 -
Tpr6g0347 150 Gene3D - 6 148 IPR036758 -
Tpr6g0347 150 PANTHER PLANT/F25P12-18 PROTEIN 2 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0347 Tpr-Chr6 2793740 2794425 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0347 - - ccaj:109788994 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0347 6 2793740 2794425 Tpr6g0347 6 2793740 2794425 ECH
Tpr6g0347 6 2793740 2794425 Tpr1g1362 1 12436226 12436963 PCT