Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1362 ATGTCTCAGCTGATCACCGAAGAGATCAGAGCCAAAGCAGAAGTATACCAAGGAGATGAAATCTGCCAAGTGAAATCCAAGGAACTGCTCTTGGAAATAAACCTACCAAATGGCCTTTTACCTTTGAAAGACATTGAAGAATGTGGATATCATAGGGAGAGTGGATTTGTGTGGCTTAAGCAGAAAGCAGGCAATACTCACAAGTTTGAGAAAGTTGATAGGCAAGTGACCTATGGTACTGAAGTCACTGCCTATGTTGAGGTTGGTAAGATCAAGAAGCTAACTGGTGTGAAGGTGAAGGAGCTGTTGGTTTGGCTTCCACTGCATGAAATTGAATTGGATAATCCACCTACTGGCAAAATCACTTTCAGGGCCATTACTGGGCTTTTCAGGACATTCCCTGCCTCAGCTTTTGAACTAGAAGATGAAGTTAAGGATGAGAAGGAAGAAAACAAAGATCAAGTCAAAGAAGCAGAAGCACCTGCTGCTACTGCTACTGCTACTACTGCTGCTCCTGTTGAAGTCAATGAGGTCTGA 537 0.432 MSQLITEEIRAKAEVYQGDEICQVKSKELLLEINLPNGLLPLKDIEECGYHRESGFVWLKQKAGNTHKFEKVDRQVTYGTEVTAYVEVGKIKKLTGVKVKELLVWLPLHEIELDNPPTGKITFRAITGLFRTFPASAFELEDEVKDEKEENKDQVKEAEAPAATATATTAAPVEVNEV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1362 178 Pfam Protein of unknown function, DUF538 27 139 IPR007493 -
Tpr1g1362 178 MobiDBLite consensus disorder prediction 142 157 - -
Tpr1g1362 178 MobiDBLite consensus disorder prediction 142 178 - -
Tpr1g1362 178 Gene3D - 6 148 IPR036758 -
Tpr1g1362 178 PANTHER PLANT/F25P12-18 PROTEIN 3 161 - -
Tpr1g1362 178 Coils Coil 137 157 - -
Tpr1g1362 178 PANTHER T31J12.3 PROTEIN-RELATED 3 161 IPR007493 -
Tpr1g1362 178 SUPERFAMILY At5g01610-like 4 143 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1362 Tpr-Chr1 12436226 12436963 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1362 - - jre:108987755 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1362 1 12436226 12436963 Tpr1g1362 1 12436226 12436963 ECH
Tpr6g0347 6 2793740 2794425 Tpr1g1362 1 12436226 12436963 PCT