Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0324 ATGGACTCTGATTCTTCTTCTCCTTGGAACACTCCTTTATCATCATCCTATAATTCCACCGTTACTTCTTCCAAATCTTATCTCTCCGCTCTTCAATCTCGATCAGATATGTTTATGGGTGGTGGTTTTGATGAAAATGATGTTGTTGATGATGATGATGATGTCAAGGAAGAATTTTTATGCCCCTTTTGTTCTGACTATTTTGATATCGTTGGATTGTGTTGCCATATCGATGAAGAACATCCAGTTGAAGCCAAAAATGGGGTTTGTCCTGTTTGTGCATTGAGGGTCGGGGTTGATATGGTTGCACACATTGCCCTACAACATGGAAGCATACTTAAGATACAGCGAAAGAGGAAATCACGGAAAGGTGGATCTTATTCAACACTATCTTTATTGAGGAAGGAGCTGCGAGAAGGAAATTTGCAATCCCTTTTGGGCGGGTCTTCATGTATAATGTCATCGTCTAATGCAGCACCTGATCCGTTGTTATCATCCTTTATATTGCCAGTAGCTGATGACTTTTCCAGTTCTCAGAGTCAACCTAACTTTCATACCGGGACAAGGCAATCCAGAAAAAGCTCAGATGAGACTCTATCAAAGAAAAACGTGGAGACACCTACCTTGTCCGTCAAGGATAAGGAAGAAAAGGAAAAAAGATGTGAGTTTGTTCAAGGGTTATTGCTGTCCACCTTCCTTGATGACATTTCATGA 714 0.4076 MDSDSSSPWNTPLSSSYNSTVTSSKSYLSALQSRSDMFMGGGFDENDVVDDDDDVKEEFLCPFCSDYFDIVGLCCHIDEEHPVEAKNGVCPVCALRVGVDMVAHIALQHGSILKIQRKRKSRKGGSYSTLSLLRKELREGNLQSLLGGSSCIMSSSNAAPDPLLSSFILPVADDFSSSQSQPNFHTGTRQSRKSSDETLSKKNVETPTLSVKDKEEKEKRCEFVQGLLLSTFLDDIS* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0324 237 PANTHER PROTEIN DEHYDRATION-INDUCED 19 21 235 IPR033347 -
Tpr6g0324 237 MobiDBLite consensus disorder prediction 1 22 - -
Tpr6g0324 237 Pfam Stress-induced protein Di19, C-terminal 130 231 IPR027935 -
Tpr6g0324 237 Pfam Drought induced 19 protein (Di19), zinc-binding 57 110 IPR008598 -
Tpr6g0324 237 MobiDBLite consensus disorder prediction 178 218 - -
Tpr6g0324 237 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 21 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0324 Tpr-Chr6 2638875 2644229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0324 - - cam:101512621 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1396 1 12776028 12778520 Tpr6g0324 6 2638875 2644229 ECH
Tpr5g1063 5 21416838 21419913 Tpr6g0324 6 2638875 2644229 ECH
Tpr6g0324 6 2638875 2644229 Tpr6g0324 6 2638875 2644229 ECH