Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g1396 ATGGACTCTGATTCCTCTTGGACTGCTCGTCTCTCTTCCGCCTCTAGACGTTATCAAGCCGCTCTTCAATCTCGATCAGATATGTTTATGGGTTTCGATGAAAACGAAGCGGACGAAGATATTAGGGAAGAGTTTCTGTGTCCATTTTGTTCTGAGTATTTTGATATTGTTGGATTGTGTTGCCACATTGATGAAGAGCATCCAATGGAGGCAAAAAATGGGGTATGTCCAGTTTGTGCATTGAGGGTGGGGGTTGATATGGTCGCGCACATAACCCTACAACATGGAAGTATATTTAAGATGCAGCGCAAGAGGAAATCGCGTAAAGGTGGATCATATTCAACGCTTTCTTTATTGAGGAAGGAGCTGAGAGAAGGAAATTTACAATCCCTTTTTGGTGGGTCTCCATGTATAGTGTCCTCGTCTAATGTAGCGCCTGATCCGCTGCTGGATTCATTTATATCGCCTTTAGGTCATGAATCTGTGAGTTCTCAGTCTCACGCACATAATGAGACAAGATCATCCAAGAAAATCTCAGATGAGACTGTATCAAAAAGCCATGTGGAGACACCAACCATGTCAGTTAAGGACAAGGAGGAGAAGACGAAAAGATGCGAGTTTGTTCAAGGGCTGTTGATGTCCACCATACTTGATGATGATTTATGA 666 0.4309 MDSDSSWTARLSSASRRYQAALQSRSDMFMGFDENEADEDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRVGVDMVAHITLQHGSIFKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSPCIVSSSNVAPDPLLDSFISPLGHESVSSQSHAHNETRSSKKISDETVSKSHVETPTMSVKDKEEKTKRCEFVQGLLMSTILDDDL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g1396 221 Pfam Stress-induced protein Di19, C-terminal 116 216 IPR027935 -
Tpr1g1396 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 219 - -
Tpr1g1396 221 MobiDBLite consensus disorder prediction 170 184 - -
Tpr1g1396 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 219 IPR033347 -
Tpr1g1396 221 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
Tpr1g1396 221 MobiDBLite consensus disorder prediction 160 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g1396 Tpr-Chr1 12776028 12778520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g1396 - - gmx:100795155 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g1396 1 12776028 12778520 Tpr6g0324 6 2638875 2644229 ECH
Tpr1g1396 1 12776028 12778520 Tpr1g1396 1 12776028 12778520 ECH
Tpr5g1063 5 21416838 21419913 Tpr1g1396 1 12776028 12778520 ECH