Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0102 ATGGAAAGAAGAGAAAAAGGTTTGAAGAAAAGGGAAGAAGAAGATGATGAAGGATTGATAAAAATGGTAGAAAAGTTGAAACTTGTTGGGAAGAGAGAAGGAAGAGGAAGATCTTCAACCCCACCACCCACTTGGAGACTTGTTGATTCTCAACACAATGTTAACACTGTTGTTCAGCAAGAATTTCTCAACTTTCCCTCCTCAGAAACACTCTCTGCAAGAAAACTTTGTGCCAAACTATGGGAATTTCATTCTCACCAGCCAGCATCTGCTAGGGACTCGAGAAGACGTGTTCAAGCATCGTCTGTTCAGCACCGTAGATCAATTAACAGAAATGGTTCTTCTCGACAGTCTGTGTCCCCTAGTAGTTGTCGTCGCTTGATGGAAGATCCGTCAAATATGGCCGTAGTGAAAGCTCTGGTAATGGAACTAGGTTTTTCTCAAACACAGGTAAAAGAGTTATTGCAACAAAAAAATGAGACTAAGCAGGAAATGGAGAACTTAATGAAGCAAATAACAGAAGACAAACTTGTTAACAAGAACAAAGAACATGAAAAGATCAAAGCCATAGTTCAATCAGTCAAGGAAGAGATTGATGTTGAAAGGAGGTTAAGAAAGCATTCAGAAAGCCTGTACCAGAAGTTGGCTAGTGAGCTTTCTGAAGTGAAGTCTTCGTTCCGTGGTACTCTGAGAGATCTTGAAAGAGAGAAAAAAGCAAGGATCCTTTTGGAGAATTTATGTGATGATTTTGCCAAAGGAGTGAGAGATTATGAACATGAACTACGATCTATTAGGCACAAAGCTAATAACGGTCATGTTAAAGGCGAAAGCCTTGATCGGCTAATACTTCATATTTCGGAAGCCTGGCTTGATGAGCGCACGCAAATGAAGCTAGTTCAAGATGGTTGTGGTAGCAATCTCCCACGTACACATTCAATTGTCGATAAGTTACGCATTGATATTGAAACAGTTCTTCGTGCAAAACGATCTATTGACTTAAAGAGAAATAATAATGCATCCATTAAAGAGCATAAGGAGATCCGCCCTCGCCTATCTTCATTGGATTCCTTTCCACTAAAGGAGACAATACATTCACCTCATAATTTTACCGAGGAAGATTCTGTTAGTACCGACATTTTTGAACAGAAAAGGACTTCTGACAAAGGACATACCAAGTGTTTTGTTGAGGGGAAATCAAGTGACATTGGAAGATACAAGACAAATCTATTAAATACTCCTAGTCCTATGGTATCAACTTTGTCTGAGACAATTCAAGGTCCACCAGAACATGATAGAGGCAAGACCAAGAGAATTACTTCAGGCCACAGCCTAGTTGGAAACAGTTCCATGTCATCAGAAGGTGATAAGGTATATCCTGAGACCATTTGCAGGGAAGATTCTTGTGTTAATTCTGCAGTTAAAGTTAATGGTAGTCCTGTTAAACAGTGGAAAACTACATTGATTGTACCAGATTTTAACAAGTCTCATTACAAATTACCTAGAGGAGTAAAAGATAATTCATTTATGGCAAAACTGCTTGAAGCAAGGTTAGAGGAACATAAATCTTGCTCTAAGACTAGCAAATGCTATTTTTGA 1596 0.3897 MERREKGLKKREEEDDEGLIKMVEKLKLVGKREGRGRSSTPPPTWRLVDSQHNVNTVVQQEFLNFPSSETLSARKLCAKLWEFHSHQPASARDSRRRVQASSVQHRRSINRNGSSRQSVSPSSCRRLMEDPSNMAVVKALVMELGFSQTQVKELLQQKNETKQEMENLMKQITEDKLVNKNKEHEKIKAIVQSVKEEIDVERRLRKHSESLYQKLASELSEVKSSFRGTLRDLEREKKARILLENLCDDFAKGVRDYEHELRSIRHKANNGHVKGESLDRLILHISEAWLDERTQMKLVQDGCGSNLPRTHSIVDKLRIDIETVLRAKRSIDLKRNNNASIKEHKEIRPRLSSLDSFPLKETIHSPHNFTEEDSVSTDIFEQKRTSDKGHTKCFVEGKSSDIGRYKTNLLNTPSPMVSTLSETIQGPPEHDRGKTKRITSGHSLVGNSSMSSEGDKVYPETICREDSCVNSAVKVNGSPVKQWKTTLIVPDFNKSHYKLPRGVKDNSFMAKLLEARLEEHKSCSKTSKCYF* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0102 531 Gene3D - 59 283 IPR027417 -
Tpr6g0102 531 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 132 527 - -
Tpr6g0102 531 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 86 129 - -
Tpr6g0102 531 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 10 85 - -
Tpr6g0102 531 PANTHER GB|AAF24581.1 10 85 IPR043424 -
Tpr6g0102 531 PANTHER GB|AAF24581.1 132 527 IPR043424 -
Tpr6g0102 531 PANTHER GB|AAF24581.1 86 129 IPR043424 -
Tpr6g0102 531 Coils Coil 144 197 - -
Tpr6g0102 531 MobiDBLite consensus disorder prediction 87 126 - -
Tpr6g0102 531 MobiDBLite consensus disorder prediction 103 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0102 Tpr-Chr6 832346 835601 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0102 - - ccaj:109797875 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0102 6 832346 835601 Tpr6g0102 6 832346 835601 ECH
Tpr6g0102 6 832346 835601 Tpr5g1381 5 26766265 26769269 PCT