Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1381 ATGAGTTTTGAGAAAGATAGAGAGAACAAAAAGATAAGAGTAATGGTGGAAAAGTGGAAGAAAGGTGTTTTTTTGGTAGGGAAAAAGGGAGGAACTTGTAGTACTCCATCACCTACATGGAGATCACTTGACCCTTCATCATGTCAACAAAATAGCATTCTTTCAACTTCAACCATTTCTGCTAGAAAGCTTTGTGCAAATCTTTGGCAAATTTATCATACCCCTTTTGTTGAAATGAACAAATGTGGTGATACCACTCTCCGCCGTCGCCGCCGCCAGTTAACTCAGCCTCCACTAGATACCCCTTCTGACCAGGTTACACCATACAAATGTGCAGCAACCCCCACAAGCTCCTTAGACTTCAAAGGTATGATTGAAGAATCAAGGTGCAACATTACAACATCGACGGAGGAGTTACTTAATGTACTAAACCGAATATGGAGTCTCGAAGAACAGCATGCATCAAATATATCAGCAATGAAAGCCTTAAAAATGGAACTAGTACGGGAGAAGCAAATGAACATGCAGGAAATCGAGAAGAAAATGACGATAGAAAAGTTTGTTAGGAAGGATAAAGAACGTGATAGAATTAAAGACGTTGTACAATCACTCAAGGAAGAGCTAGAACATGAGAGAATGTTGCGAAAGCACTATGAAAGCTTGCATCGGAAGCTTGCTAAGGAGCTTTCTGAAGTAAAGTCTTCATTCTTTGGTTGTTTGAGAAACCTTGAAAGAGAGAGAAAAACACGAATGCTTTTGGAGAATTTGTGCAACGAGTTTGCGAAAGGAATTAGAGATTATGATCAACAAGTACATTGTCTTAGGAAGAATTCAAGGAATGGTTATGTCAGAGGGAATAGCGTTGATCAGTTAATACTTCATATTTCAGAAGCTTGGCTTGACGAGCGCGCACAAATGAAGCTAGCTCAATCGGATAGCAACTTCATAGAGAGAACTCCAATTGTTGAAAAGTTAGGTTTTGATATAGAAACATTTCTTCTTGCAAACCGTTCCGGTGATTTTAGAAAATATGGTTACTCTTCGCCGAATGAGCTCAAGGAAACTTACACTATGGATTCCTTTCCACTACAAGATGCTGCAAGTGCACCTCAAGATATGGATCAGGAAGATTCCATTGATAATGACTATTTTAAAACGAAAGAGATTACCGTTGAAGGACTCCGAAAACTCGGCTCCAGACTGGAAAGAAACAATGCTACTGAGCTCCATCGAGGAAATAAAGGAAGCGAAAGTTCAATTAGGAAAGAGGTTATGTCAAAGGAAATCACTGAGGATTGTCACTTGCAAGCAAGCATTGAGAGAAACGTGTCATGTAATGACAATAATGAGAGCTGCTTTGTGGAGAAGAAATCAAATGAAATGGCAGAAGACAACATAAAACCGTGGAAATCAATGTTGATTGCTTCAGATTTCGACAAAACTGAGTCTTCTACCAAATTGCCAAAGGGAGTAAAAGAAAACACATTGTTGGCAAAACTACTTGAAGCAAGACTAGAAAGACAGAAAACTAGGTCCAAAGGCGAAAAAAGCGTCCAATCTTGA 1563 0.3928 MSFEKDRENKKIRVMVEKWKKGVFLVGKKGGTCSTPSPTWRSLDPSSCQQNSILSTSTISARKLCANLWQIYHTPFVEMNKCGDTTLRRRRRQLTQPPLDTPSDQVTPYKCAATPTSSLDFKGMIEESRCNITTSTEELLNVLNRIWSLEEQHASNISAMKALKMELVREKQMNMQEIEKKMTIEKFVRKDKERDRIKDVVQSLKEELEHERMLRKHYESLHRKLAKELSEVKSSFFGCLRNLERERKTRMLLENLCNEFAKGIRDYDQQVHCLRKNSRNGYVRGNSVDQLILHISEAWLDERAQMKLAQSDSNFIERTPIVEKLGFDIETFLLANRSGDFRKYGYSSPNELKETYTMDSFPLQDAASAPQDMDQEDSIDNDYFKTKEITVEGLRKLGSRLERNNATELHRGNKGSESSIRKEVMSKEITEDCHLQASIERNVSCNDNNESCFVEKKSNEMAEDNIKPWKSMLIASDFDKTESSTKLPKGVKENTLLAKLLEARLERQKTRSKGEKSVQS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1381 520 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 7 93 - -
Tpr5g1381 520 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 402 516 - -
Tpr5g1381 520 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 102 441 - -
Tpr5g1381 520 PANTHER GB|AAF24581.1 102 441 IPR043424 -
Tpr5g1381 520 PANTHER GB|AAF24581.1 7 93 IPR043424 -
Tpr5g1381 520 PANTHER GB|AAF24581.1 402 516 IPR043424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1381 Tpr-Chr5 26766265 26769269 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1381 - - mtr:MTR_8g028230 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1381 5 26766265 26769269 Tpr5g1381 5 26766265 26769269 ECH
Tpr6g0102 6 832346 835601 Tpr5g1381 5 26766265 26769269 PCT