Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0088 ATGTTAGAGAAATTGGAAGAGTTCAACATGGACAAAGTTATAGAAGAATTTGAGGCACTGAGCACAGATGCAGAAAGAGTTCAGAGAGAAACACTTAGAAGAATTTTGGAGGATAATGCATCAGCAGAATATTTGCTGAATTTTGGTCTTAATGGAAGAACTGATCCTGAGAGTTTCAAGGCTTGTGTTCCGATCGCTACTCATAAAGATTTGGAACCTTTTATTTATAGAATTCTTGATGGTGATGATTCAACTATTCTTACTGGAAAACCAATTACCACTATGTCTTTAAGTTCTGGCACTACTCAGGGGAAGCCAAAATATATACCGTGGAACGATGAATTATTTGAGTCCACAATGCAGATATATCGAACCTCTTTCGCCTATAGGAACAGAGAGTTTCCTATTAGCAAAAATGGGAAGGCGTTAAACTTTATATACGGTAGCAAACAGTTCAAAACAAAAGGGGGTCTAATAGCTACAACTGCTACAACCAATGTGTTTCGTAATCCATCTTACAAACCGACAATGAAGGCACTTCAATCCCAATGCTGCAGTCCAGAAGAAGTGATATTTGGTGGTGATTTTTTCCAATCATTATACTGCCATCTATTATGCGGGTTGATTTTTCGAGAGGAAGTTCAGTTGGTATCTTCGACATTCGCACATAGCATTGTCCTTTCTTTCAGAACCTTTGAACAAATTTGGGAAGAGCTTTGTAATGATATACGAGAAGGGGTTCTTAGCAGCAGAATCACAGTTCCATCTATTCGAACCGCTATGTCTAAATTACTTAAACCAAATCCGGAATTAGCTAACATAATCCACAAAAAATGTATCGGATTAAGCAACTGGTATGGTTTGATACCGGTGCTTTTTCCGAATGCAAAATACATTTATGGAATCATGACAGGTTCTATGGAACCATATTTGGAAAAATTGAGGCACTATGCCGGGGTGCTACCTTTGTTGACTGCCGATTATGGAGCTTCTGAAGGGTGGATAGCTTCAAATGTTAATCCGAAAATTCCACCAGAATTGGCAACTTATGCTGTGCTTCCTCAAATTGGTTACTTTGAGTTCATTCCTCTCAAACAACTTGAGAATGAAGATACTTTCCTAGGTGTTGATGTTCAACCTGTAGGACTCACTGAGGTGAACATTGGTGAAGAGTATGAAATTGTTATGACCACTTTCACAGGTTTATACAGGTATAGGCTAGGGGATGTGGTAAAGGTTATGGGATTCCATAACGCAACACCAGAACTCAAGTTTATTCGTAGGAGTAGTCTTCTACTGAACATTAACATCGACAAGAACACAGAGAAAGATTTACAGTTAGCTGTAGAAGCAGCAGCAAAAAATTTAGTAGAAGAGAAATTGGAAGTTGTTGAATTCACAAGTCATGTTGATTTATCGAAAGATCCTGGAAACTACGTAATCTTTTGGGAAATCAACGGCGAAGCCAGTGAAGAAGTGCTAAGTGAATGTTGCAATTGTTTGGATAAGTCTTTCATTGATGCAGGTTACACTAGTTCGCGTAAAGTCAATGCTATTGGAGCTTTAGAACTTAGAGTTGTTAGAAGAGGAACCTTCCAGAAGATTCTTGATCATTACCTTGGATTAGGAACTGCTGTTAGTCAATATAAGACACCAAGATGTGTTGGTCCTACACACAGCATTGTGTTGCAAATCTTGAGTGAAAATGTTGTCAAGAGCTATATCAGTACTGCTTTTGATTGA 1743 0.3832 MLEKLEEFNMDKVIEEFEALSTDAERVQRETLRRILEDNASAEYLLNFGLNGRTDPESFKACVPIATHKDLEPFIYRILDGDDSTILTGKPITTMSLSSGTTQGKPKYIPWNDELFESTMQIYRTSFAYRNREFPISKNGKALNFIYGSKQFKTKGGLIATTATTNVFRNPSYKPTMKALQSQCCSPEEVIFGGDFFQSLYCHLLCGLIFREEVQLVSSTFAHSIVLSFRTFEQIWEELCNDIREGVLSSRITVPSIRTAMSKLLKPNPELANIIHKKCIGLSNWYGLIPVLFPNAKYIYGIMTGSMEPYLEKLRHYAGVLPLLTADYGASEGWIASNVNPKIPPELATYAVLPQIGYFEFIPLKQLENEDTFLGVDVQPVGLTEVNIGEEYEIVMTTFTGLYRYRLGDVVKVMGFHNATPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAAKNLVEEKLEVVEFTSHVDLSKDPGNYVIFWEINGEASEEVLSECCNCLDKSFIDAGYTSSRKVNAIGALELRVVRRGTFQKILDHYLGLGTAVSQYKTPRCVGPTHSIVLQILSENVVKSYISTAFD* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0088 580 Coils Coil 579 580 - -
Tpr6g0088 580 Coils Coil 10 30 - -
Tpr6g0088 580 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 580 IPR004993 -
Tpr6g0088 580 Pfam GH3 auxin-responsive promoter 16 555 IPR004993 -
Tpr6g0088 580 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0088 Tpr-Chr6 725511 730895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g0088 5 577 EF-hand Containing Proteins AT1G23160 38.280 4.71e-132 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0088 K14506 - gmx:100794598 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0088 6 725511 730895 Tpr6g0088 6 725511 730895 ECH
Tpr6g0088 6 725511 730895 Tpr5g1420 5 27176571 27182079 PCT