Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1420 ATGTTGACTTTTTTCAAAAACATTTTACTATCTAATTTTGGACTCAATTATAAACTTTTTGTTTCTTTTCTTTCTTTTTTGGTAAAGGGGTGTCTCAATAAAATGATATTTATCTTAGGACACCGCCTACGAAGCATGAACACAGTCGCATACACCAACACTGACACAAATAATAATGTGAAAGAGTGTACCAAGATGATTGAAAAAGTTGAAAAGCTTGACATGGAAAAAGTGATAGAAAATTTTGAGAGATTAACAAAGGATGCTGAGAAAGTTCAAAGGGAAACACTGAAGAGGATTTTGGAAGAAAATGCATCAGCTGAATACTTGCAGAATTTAGGACTTAATGGAAGAACTGATCCAGAAAGTTTCAAGGCTTGTGTTCCATTGGCTATTTACAAAGATTTGGAGCCTTATATCAATAGAATGGTTGGTGGTGATGTTTCTCCTATTCTCACTGGAAAACCAATCACTGCAATTTCTTTAAGTTCTGGTACTAGTCAAGGGAAGCAAAAGTTTATACCATGGAATGATGAATTGTTTGAAACCACAGTTCAGATATATCAAACCTCTTTTGCCTTTAGGAACAGAGAATTTCCTATCCAAAATGGCAAGGCCTTAAGCTTCATCTATAGCAGCAAATCATCACAAACAAAAGGGGGTGTGACAGCAGCAACAGCAACAGCCAATGTATTCAAAAATCCAGGATACAAGCATGCAATGGAATTACTTAAGTCTCCTAGTGTCAGTCCAGATGAAGTGATATTCAGTCCAGATTTTCACCAAACACTCTACTGTCACCTCTTATGTGGACTACTTTTCCGAGATGAAGTTCAATTAGTTTCATCAACATTTGCATATAGCATAGTCTATGCTTTTCGAACCTTTGAACAAGTTTTCGATGAACTTATTACTGATATCAAAGAAGGTGTTCTTAGCAGTAGAATCACACATCAATCCATTAGAACTGCTATGTCAAAATTGCTGAAACCAAATCCTGAACTAGCTAACTTGCTCCACAAGAAATGTATCGGATTAAGCAATTGGTATGGATTGATACCAGAGCTTTTTCCAAATGTTAAATATGTTCAAGGGATTATGACAGGTTCAATGGAAGCTTATTTGAAAAAGCTGAGACACTATGCTGGAGATATTCCTCTGTTGACTTCTGAATATGGTTCTTCTGAAGGTTGGATTGCTTCAAATGTTAATCCTAAAGTGGCTCCTGAATTTGCTACTTATGCTATTCTTCCTCAAATTGCTTATTTTGAATTCATTCCTTTGACACAACTTGATGGAAATGAGGTTGAGCTAAAGCCAGTTGGATTAACTGATGTGAAGATTGGTGAAGAGTATGAGATTTTATTCACCAATCCTGCAGGCTTATACAGATATAGGCTAGGAGATGTGGTAAAGGTTATGGGTTTCCATAACTCAACTCCAGAAATCAAGTTTCTTCGCCGGAGTAACCTTTTGCTCACAATTAATATTGATAAGAACACAGAGAATGATCTACAACTATCAGTGGAAGCCGCATCCGAGTTGTTAGCTGGAGAGAAAATGGAAGTGATTGATTACACTAGCTACATCGATTTATCCAAAGAACCAGGACACTACGTTATCTTCTGGGAAATCAGTGGTGAAGCGAGTGATGAAGTGTTAGGTGAATGTTGCACATGTTTGGACAAGTCTTTTGTTGATCTTGGTTACATAAGTTCTAGAAAATCCAAAGGCATTGGAGCTCTTGAACTCCGAGTTGTTCGGAAAGGAACATTCAAAATCGTTCTTGAGCATTGTGTTCGATTAGGCACGTCGGTGAGTCAATTCAAGACACCTAGGTGTATTGGTCCTGCAAACAATGAAGTGTTGCAAATATTGTTGGCAAATGTTGTCAAGAACTATTTTAGTTTTGCATACATTTAA 1923 0.3687 MLTFFKNILLSNFGLNYKLFVSFLSFLVKGCLNKMIFILGHRLRSMNTVAYTNTDTNNNVKECTKMIEKVEKLDMEKVIENFERLTKDAEKVQRETLKRILEENASAEYLQNLGLNGRTDPESFKACVPLAIYKDLEPYINRMVGGDVSPILTGKPITAISLSSGTSQGKQKFIPWNDELFETTVQIYQTSFAFRNREFPIQNGKALSFIYSSKSSQTKGGVTAATATANVFKNPGYKHAMELLKSPSVSPDEVIFSPDFHQTLYCHLLCGLLFRDEVQLVSSTFAYSIVYAFRTFEQVFDELITDIKEGVLSSRITHQSIRTAMSKLLKPNPELANLLHKKCIGLSNWYGLIPELFPNVKYVQGIMTGSMEAYLKKLRHYAGDIPLLTSEYGSSEGWIASNVNPKVAPEFATYAILPQIAYFEFIPLTQLDGNEVELKPVGLTDVKIGEEYEILFTNPAGLYRYRLGDVVKVMGFHNSTPEIKFLRRSNLLLTINIDKNTENDLQLSVEAASELLAGEKMEVIDYTSYIDLSKEPGHYVIFWEISGEASDEVLGECCTCLDKSFVDLGYISSRKSKGIGALELRVVRKGTFKIVLEHCVRLGTSVSQFKTPRCIGPANNEVLQILLANVVKNYFSFAYI* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1420 640 Coils Coil 75 95 - -
Tpr5g1420 640 Pfam GH3 auxin-responsive promoter 82 615 IPR004993 -
Tpr5g1420 640 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 66 639 IPR004993 -
Tpr5g1420 640 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 66 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1420 Tpr-Chr5 27176571 27182079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1420 74 636 EF-hand Containing Proteins AT1G23160 38.475 3.00e-136 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1420 K14506 - gmx:100813492 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0088 6 725511 730895 Tpr5g1420 5 27176571 27182079 PCT