Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g0086 ATGGCTGATTCTTCCAAGTTGCGGTTGGTTCGCTGCCCCAAATGTGAAAATCTCCTTCCTGAGCTAGCTGATTACTCTGTCTATCAATGTGGTGGTTGCGGTGCTGTTCTTAGAGCAAAACACAAAGGTTATGTGAGTGGTAGTTTGTCAGATGAGGGAAAAGTTGGAGAAGGTTCTGGAAAATTAGAGAAAGGTTTAGCTGATTCTACTGATACTTCGGATGTTAGTGTTAACAGAAACAATGATGAAATGGGTAAAGGGGTTTCGGAGAATAAAACAAACGAGGGGGTTCGAAATCCTAATCCAAATCAATTGGAGGATGCCGAGGAGAAAGGGGTTTTGGAAAATGGTGTTGATGTCAACAGAAACAATGATGATGAAATGGGTAAATCAATGGAAAGAAAACAGGAGGAACCCAAGTCTCAAATTGATTGTGAAAATGGGTCGAAGTTATCTGGTAAAATTTCTAATTTGCAAAATGGAGATAGAGCCGAGATGGAGGGGTTTCGGAGAAAGCAACGAGCTAATTTGGAAAGTGTGAGATTTCCAACTTCCAGTTATCCTGATGAAGGACCTTCAAATGGATATTCTGGTTTTTCTAATAGTTATATGGAATCACGAAGGAATCATAAAGAAAAAGATGGAGCAAATAGGGTTCAGCATCTTGAGCAAGATCGAGCCGAGCTTTTAAGGAAGCTGGATGAGTTAAAACACCAGCTCAGTAAGTCTTCAGAAGTGGTCAACAACCCGAAAGATAAGGTTCTTCCGGATGAAAGAATGATTCCTCCAGATCCTCATCCTTTTGGTGGCTCGGATCCGTGGTTTCCCGATGGACCGTCAGGATTAAACCGGACTTCAAGGCAGTTTTATGGACATGATAAACATATGGCAGGTCCACCTCATCTTAATTATCGTCATGATCCATATCCTTATATAGGCGGTCATGAAACGGCAATGCCCAATTTCCATCCTTCGATGCATAATCCAAATCAATATGGCGATCCTTTTGCATCCCAAATGTTAAGGAGAGGTCCAAATCAGTTCTCACAGCAACCATTACATCCCTACTTTCCTGGACGGTATGTTGATCCTAATCCAGATTCATACGAACTGTATGCGCATAACAATAATGCAATGCATCACCTGCCTTCTTGCTCTTGTTTCCACTGCTATGACAACAAACGAAGAGGTTCAGTGCCAGTGCCGCCTGCTTCATTCATTAACAGCAGGTTTCCTGATACTTCAAATGATCCTATGTTGTATCATCATGAGATCCCAGATGGATTTGGTTCACATGTTCACAATTCTAGAGCTTCCGCTCCCCCTGTCCGATTTCGTGAAAATCAGTTACATACAAGATGGCCTAGTGACTTCAACTCTGAGATGGGTGGTTTTACTCGAAACCGTCCTCGGAAGGTAATGCTAGCTAGTAGTAGCCGGCGTTGCCGTCCTGTAGCTGGTGGTTCACCTTTCGTCATGTGCCATAATTGCTTTGAGTTACTGCAACTGCCTAAAAAAGCACTGGTTCTTGCAAGAAATCGTCAGCAGAAAATGCGATGTGGAGCTTGTTCTTCAGAAATCAGTTTTTCTCTCATCAATAAGAAGCTGGTTATATCTCATTCAGAGATGAAGAGACCTCCAGCAAGGGCTGATGATAGCTCTAATGAGGTTCTGAGTAGCCGTGTATCACATACTCGTGGTTTTGCAAACAGGAGCCGTGCCAACTTCTCATCTGACGATTATTCTGGTTATGATTTTCTCTCAGTAGATAAAGAATCACTTTCAGCGGCTGCTTTGAACTCTAACAAGTCGCATGAGATGCAGAATTTTCATTCTTCATCTCCTAGCACATCCGAAGATGAAAATAGTTCAGAAGTAATGATTGCTCCAAGGGAGGCTGCAAAGTCCATTCCTCGGTCAACGACAGACTCTCTATCCCCTCCTTCTGGATCACCTCCACAAGAGTATATTGATCACTCTAATAGTAACCGTGCTGTAAATCGGTTTGGAAGAGGCAACCGAAGTAGTCGGTCTGAGCAAGAGAAGGCAAAATTGGAAAAGATTACATCGCGCCAAAATTCTTTGAAAGAAACAGCAGTTGCAACTGAAATGGATGTCCATGATTATTCTAACACCGGGGTCTCCCAGGATTCAAGAGATGCTAGCCGAGAACACGACCGTCATAGATCTAACAAAGGGGGTGACTCATTCTTTGCAAACATAATCAAGAAAAGCTTCCGAGATTTCTCTCGGTCTAATCAAACAGATGATCGTGGCAAAATTAATGTTACTGTGAACGGGAAGCCCTTGTCAGATCGTATGGTTAAGAAAGCTGAAAAACATGCTGGACCAATCCAGCCTGGAAATTATTGGTATGATTTTCGGGCAGGATTCTGGGGTGTCATCGGTGGGCCTTGTCTTGGAATAATTCCTCCATTAATAGAGGAGTTCAATCATCCCTTGCCAGAGAAATGTTCTGGTGGGAATACTGGTGTGTTTGTAAATGGTAGGGAACTTCACCAAAAAGATTTGGATTTGCTATCTGGAAGAGGACTTCCCCCTGATAGAGATAGGTCTTATATCATTGAAATTTCTGGGAGAGTCCTCGACGAAGACACTGGAGAAGAGCTGGACTGCCTTGGCAAACTTGCACCAACAGTGGAGAAAGTGAAGCATGGATTCGGCATGAAAGCACCTCGAACAGCTCAATAG 2712 0.4307 MADSSKLRLVRCPKCENLLPELADYSVYQCGGCGAVLRAKHKGYVSGSLSDEGKVGEGSGKLEKGLADSTDTSDVSVNRNNDEMGKGVSENKTNEGVRNPNPNQLEDAEEKGVLENGVDVNRNNDDEMGKSMERKQEEPKSQIDCENGSKLSGKISNLQNGDRAEMEGFRRKQRANLESVRFPTSSYPDEGPSNGYSGFSNSYMESRRNHKEKDGANRVQHLEQDRAELLRKLDELKHQLSKSSEVVNNPKDKVLPDERMIPPDPHPFGGSDPWFPDGPSGLNRTSRQFYGHDKHMAGPPHLNYRHDPYPYIGGHETAMPNFHPSMHNPNQYGDPFASQMLRRGPNQFSQQPLHPYFPGRYVDPNPDSYELYAHNNNAMHHLPSCSCFHCYDNKRRGSVPVPPASFINSRFPDTSNDPMLYHHEIPDGFGSHVHNSRASAPPVRFRENQLHTRWPSDFNSEMGGFTRNRPRKVMLASSSRRCRPVAGGSPFVMCHNCFELLQLPKKALVLARNRQQKMRCGACSSEISFSLINKKLVISHSEMKRPPARADDSSNEVLSSRVSHTRGFANRSRANFSSDDYSGYDFLSVDKESLSAAALNSNKSHEMQNFHSSSPSTSEDENSSEVMIAPREAAKSIPRSTTDSLSPPSGSPPQEYIDHSNSNRAVNRFGRGNRSSRSEQEKAKLEKITSRQNSLKETAVATEMDVHDYSNTGVSQDSRDASREHDRHRSNKGGDSFFANIIKKSFRDFSRSNQTDDRGKINVTVNGKPLSDRMVKKAEKHAGPIQPGNYWYDFRAGFWGVIGGPCLGIIPPLIEEFNHPLPEKCSGGNTGVFVNGRELHQKDLDLLSGRGLPPDRDRSYIIEISGRVLDEDTGEELDCLGKLAPTVEKVKHGFGMKAPRTAQ* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g0086 903 Pfam Probable zinc-ribbon domain 486 531 IPR021480 -
Tpr6g0086 903 MobiDBLite consensus disorder prediction 543 562 - -
Tpr6g0086 903 MobiDBLite consensus disorder prediction 674 691 - -
Tpr6g0086 903 MobiDBLite consensus disorder prediction 69 84 - -
Tpr6g0086 903 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 902 IPR040244 GO:1900150
Tpr6g0086 903 MobiDBLite consensus disorder prediction 637 673 - -
Tpr6g0086 903 MobiDBLite consensus disorder prediction 718 733 - -
Tpr6g0086 903 MobiDBLite consensus disorder prediction 602 624 - -
Tpr6g0086 903 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 902 - -
Tpr6g0086 903 MobiDBLite consensus disorder prediction 602 734 - -
Tpr6g0086 903 Coils Coil 219 246 - -
Tpr6g0086 903 MobiDBLite consensus disorder prediction 48 147 - -
Tpr6g0086 903 MobiDBLite consensus disorder prediction 104 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g0086 Tpr-Chr6 712731 717356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g0086 - - gmx:100795121 1363.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0086 6 712731 717356 Tpr6g0086 6 712731 717356 ECH
Tpr6g0086 6 712731 717356 Tpr5g1423 5 27213131 27217954 PCT