Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1423 ATGGATGAATCAGCTAAGCATAGATTGGTGAGGTGTCCCAAATGTCAAAATGTTCTTCATGAGCAAGCTAGTTATTCTGTTTATCAATGTGGTGGTTGTGGAACTGTTCTTAGAGGAAAGGTTAATAATGGTAATGGAAATGGTAGTTTGTGGGAGGCATCAGATGAGGGACAGGGTGGAAGAGTTCTTTCTAAATCAGGAAATTCCTTCAGGAAAGATGTAGGTTTTATGAGTGATAATAATTCAGATGTTGATGTTAAGTCTAATGGTGGCTTCTCGAGGGAGGATCAAAGGGATTCAGAGAGATTGAGTAAGGAGCGTGAGAGGATTCTGAATCGTTCTCTTGATGGTAGCGAGAAAGGAGTTTCGGAGAACAGTTATGATGTCGGTAAAAGTAAAGGTGAAGGGGGTAAAGCAATAAGAAGGGAACACCATGAACCAAAATTTCAAGTTGGAGGGTCCAATTTCCCGAGGAGAATGTCTAATTGGCCAAACGAGGAGAGAGTTGACATGGAAGGTGTGAGATTTTCCACGTTGAATTATCCTGATGAGGGAACTTCAAGATTTTCTTATAATCATGGTGAACAATGGAATAATTATAAAGACATGGATGGTATGAGTAGGGTTCGGCACCTCGAGCAAGATCGAGCCGAGCTTCTAAGGAAGCTTGACGAGTTATCAAAGCAGCTGAGCAATTCTTCTGAAATGGTTAATAATAATCCTAAAGAAAAGGGTCATCCTGATTCAAAGATGGTTCCTCCAGGTCCTCGCAGCGGCCCTGATACTCGGTTTCCAGACGGACCTTCAGGGTCAAACCGGACGGCCTCAAAGCAATTCTTTGGTCCTAATACAAATATGGCAGGTCCTCCTTATTTTAATTATCATCACGATCCATATGGTTATACTAGTGGTCATGAAATGTCCATGCACAACTTCCACCCTTCGATGCATAACCCTAACTATATTCCTGGATATGGAGATCCTTTTGTATCGCAAAGGATGAGAGGTCCACAACATCCGTTATCCCACCAATTCCCACAACAACCGATGCATCCCTACTTTCCTGGACACTATGCTGATACCGGTCTAGATTCATATGAACAATATGCACATAATCCTATGCCGCACCCGCCTTCCTGCTCTTGTTTTCATTGCTACAACAACAAAAGAAGAGGTGTGATGCCAGCACCGCCTGCTACGTTCCTTAACAGCAGATTCCCTCATACCTCAAATGATCCTATATTAAACCGTCATGATATCCCAGTTGGTCAACTTGTTCATAATTCTAGAACTGCTATTCCGGCTGCAAATTCTCATGAAAAGCAATTACATTCAAGATTGGCTAGTGACTTCGATTCTGAGAGGGGTGGATTTCCCACAAGCCGTTCTCAGAAAGTAATGCCGGCTAGCGGTAGTCAGCGATGCCATCCTATAGCAGGTGGTGCTCCTTTCATCACATGTTATAATTGCTTCGAGTTACTGCAACTTCCTAAAAAAGTACTGGTTAAGGTGAAGATTCGTAAGCAGAAAATGAGATGTGGAGCTTGTTCTTCTGAAATAAATATTTCTGTCGTAAACAAGAAGCTAGTTACTTCTCCTCATGTGGAAACAGAAGAAACTATTGATGATGCTTCTATCGAGGTTGTGAATAGCCATGTGTCACATTCTCGTGGCCATGTGAACACAAATGGTGTTAACTTCTCATCCGATGATTATTCTGGTTTTGATTTTCACTCAGTAGATAGAGGATCTCCTGTTATGGCTTCAGACCCAAGTTTGAACTCTAGCAAGCTGCAGGAGATGCAAAGCTTCCATTCTTCATCTTCGAGTACCTCAGAGGATGAAAATAGTCCAGAAGTTATGACTGCACCAGGAGAAGCCGCTAACTCAATTCAGCCGACTAAAGCCTCGGTGTTGTCTCCACCTGCCGGCTCGCCACTTCAAGAGTATCTTGATTATTCTAGTAACAACAACCATGCAGTGAATCGGTTTGGGAAAGGCAACCAAAGTGGTCGCTCAGAACAAGAGAAGGCGGTGAAGCTAGAAAACAATACCTCAAGGCAAAATTCTTTGAAAGAGGTAGTGCTTGTATCTGAGATGGATGTCAATGATTATTCGAACTCTGGGATTTCACAGGATTATGGTGATACAAGCCGAGAAGACGACCGTACTAGATCAAGCAAAGGAGGTGAATCGTTTTTCGCAAACATTTTCAAGAAAGGTTCCCGGGGTTCTTCACAAACTGACAAAGTCGACGATCGTGAAAATTGTGTTGTTACCGTAAATGGACAACCCTTATCAGATCGTGTGGTTAAGAAAGCTGAAAAGTTAGCCGGACCAATCCAGCCAGGAAATTACTGGTATGATTCTCGGGCTGGATTTTGGGGTGTTATCGGTGGACCTTGTCGTGGAATTATTCCACCATTCATAGACGAGTTCAATTATCCTATTCCTGATAAATGTGCCGGTGGAAACACCGGTGTTTTTGTAAACGGGAGAGAACTTCACCAAAAGGATTTAGATTTGCTTTCTCGTAGAGGACTTCCAACTGATAACGATAGATCTTATATCGTTGAAATTACCGGGAGAGTCTTGGATGTAGACACAGGTGAAGAACTAGATGGCCTCGGCAAACTTGCACCAACGGTGGAGAAAGCAAAGCATGGATTTGGCATGAAAGTACCAAGAGCAGCAGCAGCATGA 2703 0.4292 MDESAKHRLVRCPKCQNVLHEQASYSVYQCGGCGTVLRGKVNNGNGNGSLWEASDEGQGGRVLSKSGNSFRKDVGFMSDNNSDVDVKSNGGFSREDQRDSERLSKERERILNRSLDGSEKGVSENSYDVGKSKGEGGKAIRREHHEPKFQVGGSNFPRRMSNWPNEERVDMEGVRFSTLNYPDEGTSRFSYNHGEQWNNYKDMDGMSRVRHLEQDRAELLRKLDELSKQLSNSSEMVNNNPKEKGHPDSKMVPPGPRSGPDTRFPDGPSGSNRTASKQFFGPNTNMAGPPYFNYHHDPYGYTSGHEMSMHNFHPSMHNPNYIPGYGDPFVSQRMRGPQHPLSHQFPQQPMHPYFPGHYADTGLDSYEQYAHNPMPHPPSCSCFHCYNNKRRGVMPAPPATFLNSRFPHTSNDPILNRHDIPVGQLVHNSRTAIPAANSHEKQLHSRLASDFDSERGGFPTSRSQKVMPASGSQRCHPIAGGAPFITCYNCFELLQLPKKVLVKVKIRKQKMRCGACSSEINISVVNKKLVTSPHVETEETIDDASIEVVNSHVSHSRGHVNTNGVNFSSDDYSGFDFHSVDRGSPVMASDPSLNSSKLQEMQSFHSSSSSTSEDENSPEVMTAPGEAANSIQPTKASVLSPPAGSPLQEYLDYSSNNNHAVNRFGKGNQSGRSEQEKAVKLENNTSRQNSLKEVVLVSEMDVNDYSNSGISQDYGDTSREDDRTRSSKGGESFFANIFKKGSRGSSQTDKVDDRENCVVTVNGQPLSDRVVKKAEKLAGPIQPGNYWYDSRAGFWGVIGGPCRGIIPPFIDEFNYPIPDKCAGGNTGVFVNGRELHQKDLDLLSRRGLPTDNDRSYIVEITGRVLDVDTGEELDGLGKLAPTVEKAKHGFGMKVPRAAAA* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1423 900 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 897 IPR040244 GO:1900150
Tpr5g1423 900 MobiDBLite consensus disorder prediction 588 618 - -
Tpr5g1423 900 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 897 - -
Tpr5g1423 900 MobiDBLite consensus disorder prediction 134 149 - -
Tpr5g1423 900 Coils Coil 209 236 - -
Tpr5g1423 900 MobiDBLite consensus disorder prediction 229 258 - -
Tpr5g1423 900 MobiDBLite consensus disorder prediction 586 633 - -
Tpr5g1423 900 Pfam Probable zinc-ribbon domain 479 524 IPR021480 -
Tpr5g1423 900 MobiDBLite consensus disorder prediction 664 692 - -
Tpr5g1423 900 MobiDBLite consensus disorder prediction 89 115 - -
Tpr5g1423 900 MobiDBLite consensus disorder prediction 707 730 - -
Tpr5g1423 900 MobiDBLite consensus disorder prediction 81 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1423 Tpr-Chr5 27213131 27217954 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1423 - - aprc:113849738 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1423 5 27213131 27217954 Tpr5g1423 5 27213131 27217954 ECH
Tpr6g0086 6 712731 717356 Tpr5g1423 5 27213131 27217954 PCT